RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA795983" and tax_phylum = "Mollusca"

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tax_superkingdom 1

tax_phylum 1

  • Mollusca · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA795983 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12259477 12259477 PRJNA795983_S_NODE_12190_length_362_cov_1.491349_g12065_i0 PRJNA795983 12190 362 1.491349 5.39868338 Pomacea canaliculata 400727 Mollusca Mollusca 52.8 0.034   NTclustered gi|1397655358|ref|XM_025256085.1| 400727 g12065 i0 100 0.0773480662983425 28 0 8 0 110 137 4995 4968 PREDICTED: Pomacea canaliculata G-protein coupled receptor 183-like (LOC112574794), transcript variant X1, mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Architaenioglossa Ampullariidae Pomacea Pomacea canaliculata
17358354 17358354 PRJNA795983_S_NODE_15114_length_336_cov_9.144487_g14989_i0 PRJNA795983 15114 336 9.144487 30.72547632 Physella acuta 109671 Mollusca Mollusca 604 1.9399999999999992e-168   NTclustered gi|2572452079|ref|XR_009385380.1| 109671 g14989 i0 99.107 4.5625 336 3 100 0 1 336 3718 3383 PREDICTED: Physella acuta large subunit ribosomal RNA (LOC131933988), rRNA blastn 1533 604 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Physidae Physella Physella acuta
25443244 25443244 PRJNA795983_S_NODE_18240_length_317_cov_1.237705_g18115_i0 PRJNA795983 18240 317 1.237705 3.92352485 Opisthokonta 33154 Mollusca Mollusca 87.9 8.14e-13   NTclustered gi|2507375730|ref|XM_048911215.2| 37623 g18115 i0 83.696 0.839116719242902 92 15 29 0 11 102 563 654 PREDICTED: Ostrea edulis iron-sulfur cluster assembly scaffold protein IscU-like (LOC125674139), mRNA blastn 266 87.9 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Ostreida Ostreidae Ostrea Ostrea edulis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;