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contig_metadata

13 rows where analysis = "blastn", bioproject = "PRJNA795983" and tax_phylum = "Discosea"

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tax_superkingdom 1

tax_phylum 1

  • Discosea · 13 ✖

tax_clade 1

bioproject 1

  • PRJNA795983 · 13 ✖

analysis 1

  • blastn · 13 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2055920 2055920 PRJNA795983_S_NODE_17222_length_322_cov_4.216867_g17097_i0 PRJNA795983 17222 322 4.216867 13.57831174 Ripella tribonemae 2047823 Discosea other_Eukaryota 499 8.979999999999999e-137   NTclustered gi|1269228471|gb|MF683596.1| 2047823 g17097 i0 94.769 101.577639751553 325 9 100 7 1 322 1622 1303 Ripella tribonemae clone 22.1.14 18S ribosomal RNA gene, partial sequence blastn 32708 499 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella tribonemae
2056233 2056233 PRJNA795983_S_NODE_8902_length_405_cov_1.174699_g8777_i0 PRJNA795983 8902 405 1.174699 4.75753095 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 58.4 8.35e-4   NTclustered gi|470469416|ref|XM_004341948.1| 1257118 g8777 i0 83.077 0.160493827160494 65 9 16 2 185 248 884 821 Acanthamoeba castellanii str. Neff MORN repeatcontaining protein (ACA1_050500), partial mRNA blastn 65 58.4 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
8433097 8433097 PRJNA795983_S_NODE_17927_length_318_cov_4.118367_g17802_i0 PRJNA795983 17927 318 4.118367 13.09640706 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 327 4.42e-85   NTclustered gi|470420395|ref|XM_004337241.1| 1257118 g17802 i0 85.449 23.8396226415094 323 37 100 8 1 318 1884 2201 Acanthamoeba castellanii str. Neff eukaryotic translation elongation factor 2, putative (ACA1_220140), partial mRNA blastn 7581 327 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
13970463 13970463 PRJNA795983_S_NODE_33971_length_256_cov_1.218579_g33846_i0 PRJNA795983 33971 256 1.218579 3.11956224 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 228 3.5999999999999986e-55   NTclustered gi|1914009695|gb|MT975597.1| 313997 g33846 i0 84.322 91.96875 236 33 91 4 1 234 40 273 Cochliopodium minus clone 2 actin gene, partial cds blastn 23544 228 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium minus
16082442 16082442 PRJNA795983_S_NODE_11213_length_373_cov_1.446667_g11088_i0 PRJNA795983 11213 373 1.446667 5.39606791 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 324 6.809999999999999e-84   NTclustered gi|470525569|ref|XM_004356569.1| 1257118 g11088 i0 82.574 6.9597855227882 373 59 99 4 1 370 391 760 Acanthamoeba castellanii str. Neff mitochondrial phosphate transporter, putative (ACA1_173800), partial mRNA blastn 2596 324 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
16082483 16082483 PRJNA795983_S_NODE_1573_length_792_cov_1.866481_g1477_i0 PRJNA795983 1573 792 1.866481 14.78252952 Cochliopodium minus 313997 Discosea other_Eukaryota 952 0   NTclustered gi|330902862|gb|JF298257.1| 313997 g1477 i0 88.943 55.6590909090909 814 28 100 32 1 792 2209 1436 Cochliopodium minus 18S ribosomal RNA gene, partial sequence blastn 44082 952 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium minus
16082802 16082802 PRJNA795983_S_NODE_6753_length_448_cov_4.605333_g6628_i0 PRJNA795983 6753 448 4.605333 20.63189184 Ripella sp. 805 1217113 Discosea other_Eukaryota 662 0   NTclustered gi|399764202|gb|JQ271713.1| 1217113 g6628 i0 93.722 101.1875 446 20 99 6 1 445 996 558 Ripella sp. 805 18S ribosomal RNA gene, partial sequence blastn 45332 662 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. 805
17358631 17358631 PRJNA795983_S_NODE_4674_length_514_cov_1.736961_g4550_i0 PRJNA795983 4674 514 1.736961 8.92797954 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 501 4.16e-137   NTclustered gi|470420395|ref|XM_004337241.1| 1257118 g4550 i0 85.246 72.9591439688716 488 70 95 2 2 488 1699 1213 Acanthamoeba castellanii str. Neff eukaryotic translation elongation factor 2, putative (ACA1_220140), partial mRNA blastn 37501 501 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
19907021 19907021 PRJNA795983_S_NODE_4196_length_536_cov_4.881210_g4073_i0 PRJNA795983 4196 536 4.88121 26.1632856 Cochliopodium minus 313997 Discosea other_Eukaryota 828 0   NTclustered gi|330902862|gb|JF298257.1| 313997 g4073 i0 96.627 59.5111940298507 504 8 94 6 35 536 4 500 Cochliopodium minus 18S ribosomal RNA gene, partial sequence blastn 31898 828 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium minus
21182662 21182662 PRJNA795983_S_NODE_3777_length_559_cov_7.668724_g3655_i0 PRJNA795983 3777 559 7.668724 42.86816716 Ripella sp. 805 1217113 Discosea other_Eukaryota 852 0   NTclustered gi|399764202|gb|JQ271713.1| 1217113 g3655 i0 94.595 99.5044722719141 555 22 99 8 1 552 550 1 Ripella sp. 805 18S ribosomal RNA gene, partial sequence blastn 55623 852 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. 805
21182728 21182728 PRJNA795983_S_NODE_4537_length_520_cov_1.711409_g4414_i0 PRJNA795983 4537 520 1.711409 8.8993268 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 237 1.31e-57   NTclustered gi|470529917|ref|XM_004368096.1| 1257118 g4414 i0 80.795 57.4211538461538 302 58 58 0 100 401 422 121 Acanthamoeba castellanii str. Neff ribosomal protein S17, putative (ACA1_292890), partial mRNA blastn 29859 237 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
22457445 22457445 PRJNA795983_S_NODE_4618_length_516_cov_2.458239_g4494_i0 PRJNA795983 4618 516 2.458239 12.68451324 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 274 9.91e-69   NTclustered gi|470441552|ref|XM_004339378.1| 1257118 g4494 i0 79.79 54.8217054263566 381 73 73 3 102 480 544 166 Acanthamoeba castellanii str. Neff ribosomal protein L10, putative (ACA1_061530), partial mRNA blastn 28288 274 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
25006370 25006370 PRJNA795983_S_NODE_11500_length_370_cov_1.006734_g11375_i0 PRJNA795983 11500 370 1.006734 3.7249158000000002 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 187 9.24e-43   NTclustered gi|470443630|ref|XM_004339621.1| 1257118 g11375 i0 79.848 2.1027027027027 263 48 71 5 3 263 265 6 Acanthamoeba castellanii str. Neff Rasrelated protein Rac1, putative (ACA1_064420), partial mRNA blastn 778 187 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;