RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA795983" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA795983 · 6 ✖

analysis 1

  • blastn · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
780066 780066 PRJNA795983_S_NODE_25721_length_282_cov_2.062201_g25596_i0 PRJNA795983 25721 282 2.062201 5.81540682 Dendronephthya gigantea 151771 Cnidaria other_Eukaryota 233 8.65e-57   NTclustered gi|1603772169|ref|XM_028548676.1| 151771 g25596 i0 83.203 4.28723404255319 256 41 90 2 27 281 578 832 PREDICTED: Dendronephthya gigantea protein transport protein Sec61 subunit alpha (LOC114527080), mRNA blastn 1209 233 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Nephtheidae Dendronephthya Dendronephthya gigantea
2056103 2056103 PRJNA795983_S_NODE_37442_length_248_cov_2.611429_g37317_i0 PRJNA795983 37442 248 2.6114289999999998 6.47634392 Actinia tenebrosa 6105 Cnidaria other_Eukaryota 159 1.28e-34   NTclustered gi|1778062832|ref|XM_031712947.1| 6105 g37317 i0 81.443 35.0725806451613 194 36 78 0 7 200 379 186 PREDICTED: Actinia tenebrosa ras-related C3 botulinum toxin substrate 1 (LOC116303415), mRNA blastn 8698 159 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Actinia Actinia tenebrosa
3331368 3331368 PRJNA795983_S_NODE_45003_length_209_cov_4.367647_g44878_i0 PRJNA795983 45003 209 4.367647 9.12838223 Hydractinia symbiolongicarpus 13093 Cnidaria other_Eukaryota 148 2.27e-31   NTclustered gi|2518991437|ref|XM_057446583.1| 13093 g44878 i0 81.152 31.1004784688995 191 30 90 5 3 190 324 511 PREDICTED: Hydractinia symbiolongicarpus ubiquitin-60S ribosomal protein L40 (LOC130636750), mRNA blastn 6500 148 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydractiniidae Hydractinia Hydractinia symbiolongicarpus
5044641 5044641 PRJNA795983_S_NODE_18304_length_316_cov_2.995885_g18179_i0 PRJNA795983 18304 316 2.995885 9.4669966 Metazoa 33208 Cnidaria other_Eukaryota 222 2.13e-53   NTclustered gi|2744867187|ref|XM_065800345.1| 6087 g18179 i0 85.321 122.28164556962 218 28 68 4 52 267 755 540 PREDICTED: Hydra vulgaris polyubiquitin-B (LOC100203041), mRNA blastn 38641 222 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydridae Hydra Hydra vulgaris
10983960 10983960 PRJNA795983_S_NODE_15209_length_336_cov_1.361217_g15084_i0 PRJNA795983 15209 336 1.361217 4.57368912 Clytia hemisphaerica 252671 Cnidaria other_Eukaryota 54.7 0.009   NTclustered gi|2782941391|ref|XM_067076241.1| 252671 g15084 i0 100 0.172619047619048 29 0 9 0 74 102 98 126 PREDICTED: Clytia hemisphaerica protein disulfide-isomerase A4-like (LOC136820007), mRNA blastn 58 54.7 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Leptothecata Clytiidae Clytia Clytia hemisphaerica
16082512 16082512 PRJNA795983_S_NODE_1873_length_740_cov_2.023988_g1774_i0 PRJNA795983 1873 740 2.023988 14.9775112 Clytia hemisphaerica 252671 Cnidaria other_Eukaryota 514 7.87e-141   NTclustered gi|2782844603|ref|XM_067056021.1| 252671 g1774 i0 84.542 64.9648648648649 524 76 71 5 218 739 1426 906 PREDICTED: Clytia hemisphaerica tubulin beta-4B chain (LOC136799316), mRNA blastn 48074 514 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Leptothecata Clytiidae Clytia Clytia hemisphaerica

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;