RNAquarium Metadata Server
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contig_metadata

10 rows where analysis = "blastn", bioproject = "PRJNA795983" and tax_kingdom = "Orthornavirae"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 10 ✖

bioproject 1

  • PRJNA795983 · 10 ✖

analysis 1

  • blastn · 10 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1216444 1216444 PRJNA795983_S_NODE_921_length_972_cov_2.526140_g849_i0 PRJNA795983 921 972 2.52614 24.5540808 Paramyxoviridae 11158 Viruses Viruses 1746 0   NTclustered gi|2721617856|gb|PP711545.1| 251774 g849 i0 99.074 85.7839506172839 972 9 100 0 1 972 930 1901 Porcine parainfluenza virus isolate PPIV-DX-Gansu-2020, partial genome blastn 83382 1746 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Rubulavirus Porcine parainfluenza virus
2056165 2056165 PRJNA795983_S_NODE_44042_length_232_cov_10.182390_g43917_i0 PRJNA795983 44042 232 10.18239 23.6231448 Mitovirus sp. 2587224 Viruses Viruses 106 1.57e-18   NTclustered gi|1698234317|gb|MN033515.1| 2587224 g43917 i0 90.123 0.349137931034483 81 8 35 0 32 112 32 112 MAG: Mitovirus sp. isolate H1_Rhizo_26_FD_scaffold_6751 sequence blastn 81 106 1 Viruses   Orthornavirae Lenarviricota Howeltoviricetes Cryppavirales Mitoviridae Mitovirus Mitovirus sp.
7594636 7594636 PRJNA795983_S_NODE_33666_length_256_cov_4.945355_g33541_i0 PRJNA795983 33666 256 4.945355 12.6601088 Orthorubulavirus 2560195 Viruses Viruses 462 9.07e-126   NTclustered gi|1378763606|gb|MF170889.1| 2560580 g33541 i0 99.219 79.5625 256 2 100 0 1 256 2053 1798 Mammalian orthorubulavirus 5 strain Rigel, complete genome blastn 20368 462 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
8869699 8869699 PRJNA795983_S_NODE_307_length_1426_cov_3.017738_g280_i0 PRJNA795983 307 1426 3.017738 43.03294388 Orthorubulavirus 2560195 Viruses Viruses 2628 0   NTclustered gi|2449300967|gb|ON241249.1| 2560580 g280 i0 99.93 97.9649368863955 1426 1 100 0 1 1426 4514 5939 Mammalian orthorubulavirus 5 isolate ATCC HTB-55 batch no 70037771, complete genome blastn 139698 2628 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
8869718 8869718 PRJNA795983_S_NODE_4847_length_507_cov_1.711982_g4723_i0 PRJNA795983 4847 507 1.711982 8.67974874 Orthorubulavirus 2560195 Viruses Viruses 937 0   NTclustered gi|2449300967|gb|ON241249.1| 2560580 g4723 i0 100 82.1992110453649 507 0 100 0 1 507 7777 8283 Mammalian orthorubulavirus 5 isolate ATCC HTB-55 batch no 70037771, complete genome blastn 41675 937 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
10144973 10144973 PRJNA795983_S_NODE_1008_length_940_cov_2.068051_g932_i0 PRJNA795983 1008 940 2.068051 19.4396794 Paramyxoviridae 11158 Viruses Viruses 1714 0   NTclustered gi|2721617856|gb|PP711545.1| 251774 g932 i0 99.574 84 940 4 100 0 1 940 5774 6713 Porcine parainfluenza virus isolate PPIV-DX-Gansu-2020, partial genome blastn 78960 1731 0.990179087232813 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Rubulavirus Porcine parainfluenza virus
13970437 13970437 PRJNA795983_S_NODE_171_length_1662_cov_5.879169_g153_i0 PRJNA795983 171 1662 5.879169 97.71178878 Orthorubulavirus 2560195 Viruses Viruses 3042 0   NTclustered gi|2449300967|gb|ON241249.1| 2560580 g153 i0 99.699 76.2809867629362 1662 5 100 0 1 1662 39 1700 Mammalian orthorubulavirus 5 isolate ATCC HTB-55 batch no 70037771, complete genome blastn 126779 3059 0.994442628309905 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
13970452 13970452 PRJNA795983_S_NODE_271_length_1472_cov_3.507505_g246_i0 PRJNA795983 271 1472 3.507505 51.6304736 Paramyxoviridae 11158 Viruses Viruses 2695 0   NTclustered gi|2721617856|gb|PP711545.1| 251774 g246 i0 99.728 68.9538043478261 1471 4 99 0 1 1471 1969 3439 Porcine parainfluenza virus isolate PPIV-DX-Gansu-2020, partial genome blastn 101500 2712 0.993731563421829 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Rubulavirus Porcine parainfluenza virus
17794205 17794205 PRJNA795983_S_NODE_29134_length_270_cov_2.619289_g29009_i0 PRJNA795983 29134 270 2.619289 7.0720803 Orthorubulavirus 2560195 Viruses Viruses 492 1.23e-134   NTclustered gi|2449300967|gb|ON241249.1| 2560580 g29009 i0 99.628 96.5703703703704 269 1 99 0 1 269 6137 5869 Mammalian orthorubulavirus 5 isolate ATCC HTB-55 batch no 70037771, complete genome blastn 26074 492 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
24168097 24168097 PRJNA795983_S_NODE_11959_length_364_cov_2.989691_g11834_i0 PRJNA795983 11959 364 2.989691 10.88247524 Paramyxoviridae 11158 Viruses Viruses 658 0   NTclustered gi|146351836|gb|EF543647.1| 149595 g11834 i0 99.448 80.3736263736264 362 2 99 0 1 362 102 463 Canine parainfluenza virus strain FA hemagglutin-neuraminidase (HN) gene, complete cds blastn 29256 664 0.990963855421687 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae   Canine parainfluenza virus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;