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contig_metadata

28 rows where analysis = "blastn", bioproject = "PRJNA795983" and tax_clade = "Amoebozoa"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 28 ✖

bioproject 1

  • PRJNA795983 · 28 ✖

analysis 1

  • blastn · 28 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
779942 779942 PRJNA795983_S_NODE_12721_length_356_cov_2.826855_g12596_i0 PRJNA795983 12721 356 2.826855 10.0636038 Soliformovum irregulare 435424 Evosea other_Eukaryota 233 1.12e-56   NTclustered gi|146448863|gb|EF513199.1| 435424 g12596 i0 80 74.3651685393258 330 55 91 10 1 325 744 1067 Soliformovum irregulare elongation factor 1A (EF1A) gene, partial cds blastn 26474 233 1 Eukaryota Amoebozoa   Evosea Variosea Fractovitellida Soliformoviidae Soliformovum Soliformovum irregulare
2055911 2055911 PRJNA795983_S_NODE_15842_length_331_cov_3.306202_g15717_i0 PRJNA795983 15842 331 3.306202 10.94352862 Dictyostelium discoideum 44689 Evosea other_Eukaryota 431 3.429999999999999e-116   NTclustered gi|66804710|ref|XM_630996.1| 352472 g15717 i0 90.938 96.214501510574 320 29 97 0 9 328 679 998 Dictyostelium discoideum AX4 hypothetical protein (act5) mRNA, complete cds blastn 31847 431 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
2055920 2055920 PRJNA795983_S_NODE_17222_length_322_cov_4.216867_g17097_i0 PRJNA795983 17222 322 4.216867 13.57831174 Ripella tribonemae 2047823 Discosea other_Eukaryota 499 8.979999999999999e-137   NTclustered gi|1269228471|gb|MF683596.1| 2047823 g17097 i0 94.769 101.577639751553 325 9 100 7 1 322 1622 1303 Ripella tribonemae clone 22.1.14 18S ribosomal RNA gene, partial sequence blastn 32708 499 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella tribonemae
2056233 2056233 PRJNA795983_S_NODE_8902_length_405_cov_1.174699_g8777_i0 PRJNA795983 8902 405 1.174699 4.75753095 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 58.4 8.35e-4   NTclustered gi|470469416|ref|XM_004341948.1| 1257118 g8777 i0 83.077 0.160493827160494 65 9 16 2 185 248 884 821 Acanthamoeba castellanii str. Neff MORN repeatcontaining protein (ACA1_050500), partial mRNA blastn 65 58.4 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
4608452 4608452 PRJNA795983_S_NODE_24704_length_286_cov_1.441315_g24579_i0 PRJNA795983 24704 286 1.441315 4.1221609 Acytostelium subglobosum 361139 Evosea other_Eukaryota 58.4 5.68e-4   NTclustered gi|831769367|ref|XM_012897229.1| 1410327 g24579 i0 94.595 0.772727272727273 37 2 13 0 52 88 128 92 Acytostelium subglobosum LB1 hypothetical protein partial mRNA blastn 221 58.4 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
4608562 4608562 PRJNA795983_S_NODE_35184_length_252_cov_2.558659_g35059_i0 PRJNA795983 35184 252 2.558659 6.44782068 Heterostelium album 2086695 Evosea other_Eukaryota 117 7.99e-22   NTclustered gi|1160571044|ref|XM_020575016.1| 670386 g35059 i0 80.392 1.12301587301587 153 30 61 0 96 248 435 283 Polysphondylium pallidum PN500 40S ribosomal protein S14 (rps14), partial mRNA blastn 283 117 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
5883853 5883853 PRJNA795983_S_NODE_8745_length_407_cov_8.056886_g8620_i0 PRJNA795983 8745 407 8.056886 32.79152602 Cribraria violacea 1334538 Evosea other_Eukaryota 396 1.57e-105   NTclustered gi|501417113|gb|JX481322.1| 1334538 g8620 i0 84.521 56.6289926289926 407 55 99 7 1 403 900 498 Cribraria violacea voucher AMFD172 elongation factor 1A (EF1A) gene, partial cds blastn 23048 396 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Liceales Cribrariaceae Cribraria Cribraria violacea
7594626 7594626 PRJNA795983_S_NODE_25926_length_281_cov_4.903846_g25801_i0 PRJNA795983 25926 281 4.903846 13.77980726 Dictyostelium 5782 Evosea other_Eukaryota 224 5.1899999999999997e-54   NTclustered gi|167948|gb|M23754.1|DDIUBIQG 44689 g25801 i0 84.348 67.4555160142349 230 34 81 2 39 267 913 685 D.discoideum ubiquitin mRNA, complete cds, clone DCUB2 blastn 18955 224 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
8433097 8433097 PRJNA795983_S_NODE_17927_length_318_cov_4.118367_g17802_i0 PRJNA795983 17927 318 4.118367 13.09640706 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 327 4.42e-85   NTclustered gi|470420395|ref|XM_004337241.1| 1257118 g17802 i0 85.449 23.8396226415094 323 37 100 8 1 318 1884 2201 Acanthamoeba castellanii str. Neff eukaryotic translation elongation factor 2, putative (ACA1_220140), partial mRNA blastn 7581 327 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
8433406 8433406 PRJNA795983_S_NODE_7_length_4318_cov_8.322968_g6_i0 PRJNA795983 7 4318 8.322968 359.38575824 Dictyostelium purpureum 5786 Evosea other_Eukaryota 73.1 3.46e-7   NTclustered gi|330796139|ref|XM_003286079.1| 5786 g6 i0 86.567 0.0398332561371005 67 8 2 1 888 953 3375 3309 Dictyostelium purpureum uncharacterized protein (DICPUDRAFT_97284), mRNA blastn 172 73.1 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
9708459 9708459 PRJNA795983_S_NODE_41908_length_242_cov_1.597633_g41783_i0 PRJNA795983 41908 242 1.597633 3.86627186 Entamoeba histolytica 5759 Evosea other_Eukaryota 52.8 0.022   NTclustered gi|183234635|ref|XM_643696.2| 294381 g41783 i0 100 0.115702479338843 28 0 12 0 43 70 2153 2126 Entamoeba histolytica HM-1:IMSS uncharacterized protein (EHI_025880), partial mRNA blastn 28 52.8 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba histolytica
10145006 10145006 PRJNA795983_S_NODE_3308_length_590_cov_3.290135_g3188_i0 PRJNA795983 3308 590 3.290135 19.4117965 Entamoeba 5758 Evosea other_Eukaryota 353 1.43e-92   NTclustered gi|67474856|ref|XM_648070.1| 294381 g3188 i0 80.514 15.4050847457627 467 85 79 6 1 464 866 1329 Entamoeba histolytica HM-1:IMSS heat shock protein 90, putative (EHI_102270), partial mRNA blastn 9089 353 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba histolytica
13970463 13970463 PRJNA795983_S_NODE_33971_length_256_cov_1.218579_g33846_i0 PRJNA795983 33971 256 1.218579 3.11956224 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 228 3.5999999999999986e-55   NTclustered gi|1914009695|gb|MT975597.1| 313997 g33846 i0 84.322 91.96875 236 33 91 4 1 234 40 273 Cochliopodium minus clone 2 actin gene, partial cds blastn 23544 228 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium minus
14808683 14808683 PRJNA795983_S_NODE_28712_length_272_cov_1.356784_g28587_i0 PRJNA795983 28712 272 1.356784 3.69045248 Cavenderia fasciculata 261658 Evosea other_Eukaryota 211 3.89e-50   NTclustered gi|470248338|ref|XM_004357633.1| 261658 g28587 i0 81.679 23.6764705882353 262 40 95 5 15 272 608 351 Cavenderia fasciculata 3-methyl-2-oxobutanoate dehydrogenase (bkdB), partial mRNA blastn 6440 211 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
16082442 16082442 PRJNA795983_S_NODE_11213_length_373_cov_1.446667_g11088_i0 PRJNA795983 11213 373 1.446667 5.39606791 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 324 6.809999999999999e-84   NTclustered gi|470525569|ref|XM_004356569.1| 1257118 g11088 i0 82.574 6.9597855227882 373 59 99 4 1 370 391 760 Acanthamoeba castellanii str. Neff mitochondrial phosphate transporter, putative (ACA1_173800), partial mRNA blastn 2596 324 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
16082483 16082483 PRJNA795983_S_NODE_1573_length_792_cov_1.866481_g1477_i0 PRJNA795983 1573 792 1.866481 14.78252952 Cochliopodium minus 313997 Discosea other_Eukaryota 952 0   NTclustered gi|330902862|gb|JF298257.1| 313997 g1477 i0 88.943 55.6590909090909 814 28 100 32 1 792 2209 1436 Cochliopodium minus 18S ribosomal RNA gene, partial sequence blastn 44082 952 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium minus
16082802 16082802 PRJNA795983_S_NODE_6753_length_448_cov_4.605333_g6628_i0 PRJNA795983 6753 448 4.605333 20.63189184 Ripella sp. 805 1217113 Discosea other_Eukaryota 662 0   NTclustered gi|399764202|gb|JQ271713.1| 1217113 g6628 i0 93.722 101.1875 446 20 99 6 1 445 996 558 Ripella sp. 805 18S ribosomal RNA gene, partial sequence blastn 45332 662 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. 805
16519420 16519420 PRJNA795983_S_NODE_43293_length_240_cov_3.544910_g43168_i0 PRJNA795983 43293 240 3.54491 8.507784 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 265 2.5499999999999996e-66   NTclustered gi|1160557950|ref|XM_020575808.1| 670386 g43168 i0 86.864 294.408333333333 236 31 98 0 3 238 779 544 Polysphondylium pallidum PN500 ubiquitin (ubqI), partial mRNA blastn 70658 265 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
17358443 17358443 PRJNA795983_S_NODE_25774_length_282_cov_1.473684_g25649_i0 PRJNA795983 25774 282 1.473684 4.15578888 Acytostelium subglobosum 361139 Evosea other_Eukaryota 58.4 5.59e-4   NTclustered gi|831753317|ref|XM_012892323.1| 1410327 g25649 i0 97.059 1.30851063829787 34 1 12 0 57 90 949 982 Acytostelium subglobosum LB1 hypothetical protein partial mRNA blastn 369 58.4 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
17358631 17358631 PRJNA795983_S_NODE_4674_length_514_cov_1.736961_g4550_i0 PRJNA795983 4674 514 1.736961 8.92797954 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 501 4.16e-137   NTclustered gi|470420395|ref|XM_004337241.1| 1257118 g4550 i0 85.246 72.9591439688716 488 70 95 2 2 488 1699 1213 Acanthamoeba castellanii str. Neff eukaryotic translation elongation factor 2, putative (ACA1_220140), partial mRNA blastn 37501 501 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
19068184 19068184 PRJNA795983_S_NODE_21195_length_301_cov_3.245614_g21070_i0 PRJNA795983 21195 301 3.2456140000000002 9.76929814 Dictyostelium 5782 Evosea other_Eukaryota 189 2.05e-43   NTclustered gi|290038|gb|L11591.1|DDIRACA 44689 g21070 i0 80.784 35.1196013289037 255 38 83 11 15 265 282 35 Slime mold RacA protein mRNA, partial cds blastn 10571 189 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
19907021 19907021 PRJNA795983_S_NODE_4196_length_536_cov_4.881210_g4073_i0 PRJNA795983 4196 536 4.88121 26.1632856 Cochliopodium minus 313997 Discosea other_Eukaryota 828 0   NTclustered gi|330902862|gb|JF298257.1| 313997 g4073 i0 96.627 59.5111940298507 504 8 94 6 35 536 4 500 Cochliopodium minus 18S ribosomal RNA gene, partial sequence blastn 31898 828 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium minus
21182485 21182485 PRJNA795983_S_NODE_1817_length_748_cov_1.674074_g1718_i0 PRJNA795983 1817 748 1.674074 12.52207352 Dictyostelium purpureum 5786 Evosea other_Eukaryota 592 3.569999999999999e-164   NTclustered gi|330822624|ref|XM_003291701.1| 5786 g1718 i0 82.066 81.4224598930481 697 121 93 4 28 722 1402 708 Dictyostelium purpureum vacuolar H+ ATPase B subunit (DICPUDRAFT_50012), mRNA blastn 60904 592 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
21182559 21182559 PRJNA795983_S_NODE_25497_length_283_cov_1.490476_g25372_i0 PRJNA795983 25497 283 1.490476 4.21804708 Tieghemostelium lacteum 361077 Evosea other_Eukaryota 248 3.1e-61   NTclustered gi|354683898|gb|JN048925.1| 361077 g25372 i0 83.459 17.0459363957597 266 44 94 0 6 271 1603 1868 Tieghemostelium lacteum cell division cycle protein 48 gene, complete cds blastn 4824 248 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Tieghemostelium Tieghemostelium lacteum
21182662 21182662 PRJNA795983_S_NODE_3777_length_559_cov_7.668724_g3655_i0 PRJNA795983 3777 559 7.668724 42.86816716 Ripella sp. 805 1217113 Discosea other_Eukaryota 852 0   NTclustered gi|399764202|gb|JQ271713.1| 1217113 g3655 i0 94.595 99.5044722719141 555 22 99 8 1 552 550 1 Ripella sp. 805 18S ribosomal RNA gene, partial sequence blastn 55623 852 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. 805
21182728 21182728 PRJNA795983_S_NODE_4537_length_520_cov_1.711409_g4414_i0 PRJNA795983 4537 520 1.711409 8.8993268 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 237 1.31e-57   NTclustered gi|470529917|ref|XM_004368096.1| 1257118 g4414 i0 80.795 57.4211538461538 302 58 58 0 100 401 422 121 Acanthamoeba castellanii str. Neff ribosomal protein S17, putative (ACA1_292890), partial mRNA blastn 29859 237 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
22457445 22457445 PRJNA795983_S_NODE_4618_length_516_cov_2.458239_g4494_i0 PRJNA795983 4618 516 2.458239 12.68451324 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 274 9.91e-69   NTclustered gi|470441552|ref|XM_004339378.1| 1257118 g4494 i0 79.79 54.8217054263566 381 73 73 3 102 480 544 166 Acanthamoeba castellanii str. Neff ribosomal protein L10, putative (ACA1_061530), partial mRNA blastn 28288 274 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
25006370 25006370 PRJNA795983_S_NODE_11500_length_370_cov_1.006734_g11375_i0 PRJNA795983 11500 370 1.006734 3.7249158000000002 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 187 9.24e-43   NTclustered gi|470443630|ref|XM_004339621.1| 1257118 g11375 i0 79.848 2.1027027027027 263 48 71 5 3 263 265 6 Acanthamoeba castellanii str. Neff Rasrelated protein Rac1, putative (ACA1_064420), partial mRNA blastn 778 187 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;