RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA795663" and tax_phylum = "Chytridiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA795663 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5044536 5044536 PRJNA795663_S_NODE_18624_length_151_cov_1.561404_g18519_i0 PRJNA795663 18624 151 1.561404 2.35772004 Staurastromyces 2006669 Fungi Fungi 108 2.59e-19   NTclustered gi|2465121858|gb|OQ687259.1| 687209 g18519 i0 81.618 89.3245033112583 136 20 89 4 18 151 405 537 Uncultured Rhizophydiales isolate UMPB-1297 small subunit ribosomal RNA gene, partial sequence blastn 13488 108 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales     uncultured Rhizophydiales
12258829 12258829 PRJNA795663_S_NODE_13910_length_169_cov_1.462121_g13805_i0 PRJNA795663 13910 169 1.462121 2.47098449 Spizellomyces punctatus 109760 Fungi Fungi 176 8.03e-40   NTclustered gi|1027002790|ref|XM_016754434.1| 645134 g13805 i0 85.629 73.7396449704142 167 24 99 0 1 167 521 355 Spizellomyces punctatus DAOM BR117 polyubiquitin (SPPG_06227), mRNA blastn 12462 176 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Spizellomyces Spizellomyces punctatus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;