RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA795663" and tax_kingdom = "Orthornavirae"

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tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 2 ✖

bioproject 1

  • PRJNA795663 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13532926 13532926 PRJNA795663_S_NODE_12951_length_174_cov_1.569343_g12846_i0 PRJNA795663 12951 174 1.569343 2.73065682 Hainan alphaflexivirus 2 2824425 Viruses Viruses 272 1.03e-68   NTclustered gi|2075444288|gb|MW897284.1| 2824425 g12846 i0 95.322 146.189655172414 171 8 98 0 1 171 4527 4357 MAG: Hainan alphaflexivirus 2 isolate R87-k141_314575 replicase gene, partial cds; and NTP-binding helicase and hypothetical protein genes, complete cds blastn 25437 272 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae   Hainan alphaflexivirus 2
14808047 14808047 PRJNA795663_S_NODE_492_length_715_cov_4.724189_g415_i0 PRJNA795663 492 715 4.724189 33.77795135 Gammacystovirus phi13 3428905 Viruses Viruses 335 6.339999999999999e-87   NTclustered gi|22855198|ref|NC_004171.1| 134554 g415 i0 79.198 0.732867132867133 524 77 71 26 1 509 799 293 Pseudomonas phage phi13 segment M, complete sequence blastn 524 335 1 Viruses   Orthornavirae Duplornaviricota Vidaverviricetes Mindivirales Cystoviridae Gammacystovirus Gammacystovirus phi13

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;