RNAquarium Metadata Server
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contig_metadata

9 rows where analysis = "blastn", bioproject = "PRJNA795663" and tax_clade = "Discoba"

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tax_superkingdom 1

tax_phylum 1

tax_clade 1

  • Discoba · 9 ✖

bioproject 1

  • PRJNA795663 · 9 ✖

analysis 1

  • blastn · 9 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9707476 9707476 PRJNA795663_S_NODE_10868_length_186_cov_20.255034_g10763_i0 PRJNA795663 10868 186 20.255034 37.67436324 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 333 5.069999999999999e-87   NTclustered gi|2874368072|gb|PQ819796.1| 1874883 g10763 i0 98.925 99.0752688172043 186 2 100 0 1 186 2711 2896 Allovahlkampfia sp. strain BA small subunit ribosomal RNA gene, partial sequence blastn 18428 333 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
9707519 9707519 PRJNA795663_S_NODE_1308_length_481_cov_9.135135_g1206_i0 PRJNA795663 1308 481 9.135135 43.93999935 Allovahlkampfia sp. PKD 2011a 1217110 Heterolobosea other_Eukaryota 889 0   NTclustered gi|399764157|gb|JQ271668.1| 1217110 g1206 i0 100 34.8773388773389 481 0 100 0 1 481 34 514 Allovahlkampfia sp. PKD 2011a strain 4165 18S ribosomal RNA gene, partial sequence blastn 16776 889 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp. PKD 2011a
9707677 9707677 PRJNA795663_S_NODE_3768_length_297_cov_4.953846_g3663_i0 PRJNA795663 3768 297 4.953846 14.71292262 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 503 6.34e-138   NTclustered gi|2651357779|gb|PP174295.1| 1874883 g3663 i0 99.281 49.9191919191919 278 2 94 0 20 297 2590 2867 Allovahlkampfia sp. isolate P10 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 14826 503 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
10983248 10983248 PRJNA795663_S_NODE_13649_length_170_cov_2.759398_g13544_i0 PRJNA795663 13649 170 2.759398 4.6909766 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 303 3.55e-78   NTclustered gi|2651357779|gb|PP174295.1| 1874883 g13544 i0 98.83 24.2941176470588 171 1 100 1 1 170 3147 2977 Allovahlkampfia sp. isolate P10 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 4130 303 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
12696058 12696058 PRJNA795663_S_NODE_6150_length_237_cov_27.150000_g6045_i0 PRJNA795663 6150 237 27.15 64.3455 Naegleria 5761 Heterolobosea other_Eukaryota 148 2.6399999999999998e-31   NTclustered gi|2031946985|emb|OD958550.1| 5763 g6045 i0 79.724 31.0928270042194 217 34 92 5 1 217 3012 3218 Naegleria fowleri Karachi_NF001 strain blastn 7369 148 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
17357664 17357664 PRJNA795663_S_NODE_13214_length_172_cov_12.792593_g13109_i0 PRJNA795663 13214 172 12.792593 22.00325996 Naegleria jadini 51636 Heterolobosea other_Eukaryota 230 6.21e-56   NTclustered gi|2438257170|gb|OP997288.1| 51636 g13109 i0 94.595 86.7209302325581 148 8 86 0 21 168 5176 5323 Naegleria jadini strain ITMAP400 plasmid CERE, complete sequence blastn 14916 230 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria jadini
21618540 21618540 PRJNA795663_S_NODE_4337_length_279_cov_49.553719_g4232_i0 PRJNA795663 4337 279 49.553719 138.25487601 Allovahlkampfia 1217108 Heterolobosea other_Eukaryota 449 7.799999999999999e-122   NTclustered gi|399764157|gb|JQ271668.1| 1217110 g4232 i0 100 78.9354838709677 243 0 87 0 21 263 1758 2000 Allovahlkampfia sp. PKD 2011a strain 4165 18S ribosomal RNA gene, partial sequence blastn 22023 449 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp. PKD 2011a
22456576 22456576 PRJNA795663_S_NODE_278_length_905_cov_61.578341_g219_i0 PRJNA795663 278 905 61.578341 557.28398605 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 1458 0   NTclustered gi|2651357779|gb|PP174295.1| 1874883 g219 i0 95.912 15.4585635359116 905 27 99 1 11 905 4378 3474 Allovahlkampfia sp. isolate P10 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 13990 1458 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
22894017 22894017 PRJNA795663_S_NODE_4438_length_276_cov_44.790795_g4333_i0 PRJNA795663 4438 276 44.790795 123.6225942 Allovahlkampfia 1217108 Heterolobosea other_Eukaryota 468 2.13e-127   NTclustered gi|399764157|gb|JQ271668.1| 1217110 g4333 i0 100 65.9927536231884 253 0 92 0 24 276 1522 1774 Allovahlkampfia sp. PKD 2011a strain 4165 18S ribosomal RNA gene, partial sequence blastn 18214 468 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp. PKD 2011a

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;