RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA793147" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 2 ✖

tax_phylum 1

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA793147 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4606673 4606673 PRJNA793147_P_NODE_62044_length_226_cov_0.917197_g61778_i0 PRJNA793147 62044 226 0.917197 2.07286522 Natronomonas pharaonis 2257 Archaea Archaea 281 2.36e-71   NTclustered gi|76556520|emb|CR936257.1| 348780 g61778 i0 96.491 16.3628318584071 171 5 100 1 57 226 1414845 1414675 Natronomonas pharaonis DSM 2160 complete genome blastn 3698 281 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natronomonadaceae Natronomonas Natronomonas pharaonis
17355970 17355970 PRJNA793147_P_NODE_28754_length_311_cov_1.545455_g28488_i0 PRJNA793147 28754 311 1.545455 4.80636505 uncultured archaeon 115547 Archaea Archaea 547 3.0399999999999987e-151   NTclustered gi|283837223|dbj|AB541780.1| 115547 g28488 i0 98.392 104.627009646302 311 5 100 0 1 311 44 354 Uncultured archaeon gene for 16S rRNA, partial sequence, clone: K09_10_18 blastn 32539 547 1 Archaea               uncultured archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;