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contig_metadata

18 rows where analysis = "blastn", bioproject = "PRJNA793147" and tax_phylum = "Platyhelminthes"

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tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 18 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA793147 · 18 ✖

analysis 1

  • blastn · 18 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2054203 2054203 PRJNA793147_P_NODE_60762_length_227_cov_0.911392_g60496_i0 PRJNA793147 60762 227 0.911392 2.06885984 Dicrocoelium dendriticum 57078 Platyhelminthes Platyhelminthes 58.4 4.35e-4   NTclustered gi|687515419|emb|LK667940.1| 57078 g60496 i0 100 8.90748898678414 31 0 14 0 8 38 446 476 Dicrocoelium dendriticum genome assembly D_dendriticum_Leon_v1_0_4, scaffold DDEL_scaffold0248047 blastn 2022 58.4 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Dicrocoeliidae Dicrocoelium Dicrocoelium dendriticum
3328648 3328648 PRJNA793147_P_NODE_22083_length_354_cov_1.754386_g21817_i0 PRJNA793147 22083 354 1.754386 6.21052644 Schistosoma haematobium 6185 Platyhelminthes Platyhelminthes 235 3.1e-57   NTclustered gi|2318773564|ref|XM_012938078.3| 6185 g21817 i0 78.977 1.36158192090395 352 69 99 5 1 349 80 429 Schistosoma haematobium CCR4-Not complex caf1 ribonuclease subunit Caf1, variant 2 (CAF1_2), partial mRNA blastn 482 235 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma haematobium
4606252 4606252 PRJNA793147_P_NODE_41224_length_262_cov_5.170984_g40958_i0 PRJNA793147 41224 262 5.170984 13.54797808 Gyrodactylus salaris 37629 Platyhelminthes Platyhelminthes 318 2.1299999999999995e-82   NTclustered gi|38488400|emb|AJ607426.1| 37629 g40958 i0 88.55 6.06488549618321 262 30 100 0 1 262 308 47 Gyrodactylus salaris mRNA for beta-tubulin blastn 1589 318 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Monogenea Gyrodactylidea Gyrodactylidae Gyrodactylus Gyrodactylus salaris
5881212 5881212 PRJNA793147_P_NODE_32705_length_293_cov_1.790179_g32439_i0 PRJNA793147 32705 293 1.790179 5.24522447 Centrocestus formosanus 234883 Platyhelminthes Platyhelminthes 459 1.37e-124   NTclustered gi|2905014696|gb|PV021483.1| 234883 g32439 i0 95.172 0.989761092150171 290 14 99 0 1 290 8577 8866 Centrocestus formosanus mitochondrion, complete genome blastn 290 459 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Opisthorchiida Heterophyidae Centrocestus Centrocestus formosanus
6320062 6320062 PRJNA793147_P_NODE_6405_length_710_cov_1.343214_g6152_i0 PRJNA793147 6405 710 1.343214 9.5368194 root 1 Root_unresolved Root_unresolved 366 2.2299999999999993e-96   NTclustered gi|4761225|gb|AF113971.1|AF113971 6182 g6152 i0 78.495 13.4845070422535 558 120 79 0 62 619 2493 1936 Schistosoma japonicum paramyosin mRNA, complete cds blastn 9574 366 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
12256972 12256972 PRJNA793147_P_NODE_15690_length_427_cov_4.229050_g15424_i0 PRJNA793147 15690 427 4.22905 18.0580435 Gyrodactylus sp. h XJ-2022 2993691 Platyhelminthes Platyhelminthes 784 0   NTclustered gi|2326463201|gb|OP793860.1| 2993691 g15424 i0 99.766 79.6674473067916 427 1 100 0 1 427 619 193 Gyrodactylus sp. h XJ-2022 isolate JX202202-4 small subunit ribosomal RNA gene, partial sequence blastn 34018 784 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Monogenea Gyrodactylidea Gyrodactylidae Gyrodactylus Gyrodactylus sp. h XJ-2022
12256999 12256999 PRJNA793147_P_NODE_17430_length_402_cov_7.399399_g17164_i0 PRJNA793147 17430 402 7.399399 29.74558398 Gyrodactylus salaris 37629 Platyhelminthes Platyhelminthes 701 0   NTclustered gi|44885231|emb|AJ542394.1| 37629 g17164 i0 98.01 39.4900497512438 402 8 100 0 1 402 3364 3765 Gyrodactylus salaris 28S rRNA gene blastn 15875 704 0.995738636363636 Eukaryota Opisthokonta Metazoa Platyhelminthes Monogenea Gyrodactylidea Gyrodactylidae Gyrodactylus Gyrodactylus salaris
13531349 13531349 PRJNA793147_P_NODE_33411_length_290_cov_1.954751_g33145_i0 PRJNA793147 33411 290 1.954751 5.6687779 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 121 7.26e-23   NTclustered gi|226467266|emb|FN320388.1| 6182 g33145 i0 86.916 7.67931034482759 107 14 37 0 1 107 1267 1373 Schistosoma japonicum isolate Anhui full length mRNA clone SJFCE3598.005|FSE001-P00027-M23, complete sequence blastn 2227 121 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
16079984 16079984 PRJNA793147_P_NODE_19973_length_373_cov_2.766447_g19707_i0 PRJNA793147 19973 373 2.766447 10.31884731 Gyrodactylus banmae 2907319 Platyhelminthes Platyhelminthes 689 0   NTclustered gi|1983548782|gb|MW593152.1| 2907319 g19707 i0 100 14.1286863270777 373 0 100 0 1 373 1112 1484 Gyrodactylus banmae isolate A cytochrome c oxidase subunit I (COX1) gene, complete cds; mitochondrial blastn 5270 689 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Monogenea Gyrodactylidea Gyrodactylidae Gyrodactylus Gyrodactylus banmae
16079994 16079994 PRJNA793147_P_NODE_20513_length_368_cov_1.882943_g20247_i0 PRJNA793147 20513 368 1.882943 6.92923024 Metorchis orientalis 674132 Platyhelminthes Platyhelminthes 300 1.13e-76   NTclustered gi|937546747|ref|NC_028008.1| 674132 g20247 i0 82.548 62.6929347826087 361 43 95 17 20 368 9195 8843 Metorchis orientalis mitochondrion, complete genome blastn 23071 300 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Opisthorchiida Opisthorchiidae Metorchis Metorchis orientalis
17355651 17355651 PRJNA793147_P_NODE_11114_length_517_cov_1.848214_g10850_i0 PRJNA793147 11114 517 1.848214 9.55526638 Gyrodactylus salaris 37629 Platyhelminthes Platyhelminthes 283 1.65e-71   NTclustered gi|38488400|emb|AJ607426.1| 37629 g10850 i0 83.721 59.2050290135397 301 47 58 2 218 517 1324 1025 Gyrodactylus salaris mRNA for beta-tubulin blastn 30609 283 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Monogenea Gyrodactylidea Gyrodactylidae Gyrodactylus Gyrodactylus salaris
17355707 17355707 PRJNA793147_P_NODE_14614_length_444_cov_6.048000_g14348_i0 PRJNA793147 14614 444 6.048 26.85312 Gyrodactylus salaris 37629 Platyhelminthes Platyhelminthes 758 0   NTclustered gi|44885231|emb|AJ542394.1| 37629 g14348 i0 97.309 89.0810810810811 446 10 100 2 1 444 3215 2770 Gyrodactylus salaris 28S rRNA gene blastn 39552 758 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Monogenea Gyrodactylidea Gyrodactylidae Gyrodactylus Gyrodactylus salaris
17793639 17793639 PRJNA793147_P_NODE_37234_length_275_cov_2.786408_g36968_i0 PRJNA793147 37234 275 2.786408 7.662622 Gyrodactylus 37846 Platyhelminthes Platyhelminthes 497 2.7e-136   NTclustered gi|40994727|emb|AJ566375.1| 147591 g36968 i0 99.273 93.8181818181818 275 2 100 0 1 275 316 42 Gyrodactylus gobiensis 18S rRNA gene blastn 25800 497 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Monogenea Gyrodactylidea Gyrodactylidae Gyrodactylus Gyrodactylus gobiensis
18629067 18629067 PRJNA793147_P_NODE_19595_length_377_cov_1.977273_g19329_i0 PRJNA793147 19595 377 1.977273 7.45431921 Gyrodactylus kobayashii 89149 Platyhelminthes Platyhelminthes 220 9.3e-53   NTclustered gi|1025806290|ref|NC_030050.1| 89149 g19329 i0 77.368 1.0079575596817 380 80 100 6 1 377 13898 13522 Gyrodactylus kobayashii mitochondrion, complete genome blastn 380 220 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Monogenea Gyrodactylidea Gyrodactylidae Gyrodactylus Gyrodactylus kobayashii
18629102 18629102 PRJNA793147_P_NODE_21815_length_356_cov_9.780488_g21549_i0 PRJNA793147 21815 356 9.780488 34.81853728 Echinococcus granulosus 6210 Platyhelminthes Platyhelminthes 182 4.12e-41   NTclustered gi|1373855486|ref|XM_024494120.1| 6210 g21549 i0 77.316 25.6938202247191 313 67 87 3 3 313 1 311 Echinococcus granulosus 60S ribosomal protein L36a (EGR_04871), partial mRNA blastn 9147 182 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Taeniidae Echinococcus Echinococcus granulosus
21617893 21617893 PRJNA793147_P_NODE_11837_length_499_cov_16.569767_g11572_i0 PRJNA793147 11837 499 16.569767 82.68313733 Gyrodactylus 37846 Platyhelminthes Platyhelminthes 889 0   NTclustered gi|1941833495|gb|MW353802.1| 2907319 g11572 i0 98.798 100.050100200401 499 6 100 0 1 499 607 1105 Gyrodactylus banmae internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence blastn 49925 894 0.994407158836689 Eukaryota Opisthokonta Metazoa Platyhelminthes Monogenea Gyrodactylidea Gyrodactylidae Gyrodactylus Gyrodactylus banmae
22454766 22454766 PRJNA793147_P_NODE_19338_length_380_cov_2.038585_g19072_i0 PRJNA793147 19338 380 2.038585 7.746623 Centrocestus formosanus 234883 Platyhelminthes Platyhelminthes 686 0   NTclustered gi|2905014696|gb|PV021483.1| 234883 g19072 i0 99.211 88.7394736842105 380 3 100 0 1 380 9406 9027 Centrocestus formosanus mitochondrion, complete genome blastn 33721 686 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Opisthorchiida Heterophyidae Centrocestus Centrocestus formosanus
22455051 22455051 PRJNA793147_P_NODE_37518_length_274_cov_2.429268_g37252_i0 PRJNA793147 37518 274 2.429268 6.65619432 Gyrodactylus banmae 2907319 Platyhelminthes Platyhelminthes 507 4.47e-139   NTclustered gi|1983548782|gb|MW593152.1| 2907319 g37252 i0 100 98.9598540145985 274 0 100 0 1 274 611 884 Gyrodactylus banmae isolate A cytochrome c oxidase subunit I (COX1) gene, complete cds; mitochondrial blastn 27115 507 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Monogenea Gyrodactylidea Gyrodactylidae Gyrodactylus Gyrodactylus banmae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;