RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA793147" and tax_phylum = "Negarnaviricota"

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tax_superkingdom 1

tax_phylum 1

  • Negarnaviricota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA793147 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12695632 12695632 PRJNA793147_P_NODE_51430_length_235_cov_0.867470_g51164_i0 PRJNA793147 51430 235 0.86747 2.0385545 Viruses 10239 Viruses Viruses 407 3.9e-109   NTclustered gi|2618835662|tpg|BK064324.1| 3078349 g51164 i0 97.872 3 235 5 100 0 1 235 4601 4367 TPA_asm: Lycium betacytorhabdovirus 1 cRNA sequence blastn 705 407 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Rhabdoviridae   Lycium betacytorhabdovirus 1
14806805 14806805 PRJNA793147_P_NODE_58072_length_229_cov_0.900000_g57806_i0 PRJNA793147 58072 229 0.9 2.061 Orthorubulavirus mammalis 3052558 Viruses Viruses 424 3.76e-114   NTclustered gi|1028325827|gb|KX060176.1| 2905673 g57806 i0 100 84.9039301310044 229 0 100 0 1 229 2602 2374 Parainfluenza virus 5 strain AGS, complete genome blastn 19443 424 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
18628983 18628983 PRJNA793147_P_NODE_14675_length_443_cov_2.930481_g14409_i0 PRJNA793147 14675 443 2.930481 12.98203083 Zebrafish influenza B-like virus RQ01 Viruses Viruses 396 1.72e-105   NTclustered gi|384038769|gb|CY115203.1| RQ01 g14409 i0 85.204 88.6049661399549 392 50 88 7 56 443 637 1024 Influenza B virus (B/reassortant/NYMC BX-43(Lee/1940 x Hong Kong/259/2010)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds blastn 39252 396 1 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae Betainfluenzavirus Zebrafish influenza B-like virus
22455342 22455342 PRJNA793147_P_NODE_53498_length_233_cov_0.878049_g53232_i0 PRJNA793147 53498 233 0.878049 2.04585417 Lycium betacytorhabdovirus 1 3078349 Viruses Viruses 409 1.07e-109   NTclustered gi|2618835662|tpg|BK064324.1| 3078349 g53232 i0 98.283 3 233 4 100 0 1 233 2491 2723 TPA_asm: Lycium betacytorhabdovirus 1 cRNA sequence blastn 699 409 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Rhabdoviridae   Lycium betacytorhabdovirus 1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;