RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA793147" and tax_kingdom = "Bamfordvirae"

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tax_superkingdom 1

tax_kingdom 1

  • Bamfordvirae · 3 ✖

bioproject 1

  • PRJNA793147 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5044081 5044081 PRJNA793147_P_NODE_38804_length_270_cov_1.432836_g38538_i0 PRJNA793147 38804 270 1.432836 3.8686572 Mimiviridae 549779 Viruses Viruses 58.4 5.32e-4   NTclustered gi|363539767|ref|NC_016072.1| 1094892 g38538 i0 89.13 2.01481481481481 46 5 17 0 66 111 336580 336535 Megavirus chiliensis, complete genome blastn 544 58.4 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Megavirus Megavirus chilense
15244264 15244264 PRJNA793147_P_NODE_29092_length_309_cov_2.604167_g28826_i0 PRJNA793147 29092 309 2.604167 8.04687603 root 1 Root_unresolved Root_unresolved 566 8.33e-157   NTclustered gi|2452970428|gb|OQ518271.1| 10515 g28826 i0 99.676 100 309 1 100 0 1 309 2016 1708 Human adenovirus 2 isolate HAdV-C2/USA/8A5/2011, complete genome blastn 30900 571 0.991243432574431 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
17793686 17793686 PRJNA793147_P_NODE_47834_length_243_cov_1.574713_g47568_i0 PRJNA793147 47834 243 1.574713 3.82655259 root 1 Root_unresolved Root_unresolved 276 1.19e-69   NTclustered gi|2079660854|emb|OU501479.1| 10515 g47568 i0 100 101.234567901235 149 0 100 0 95 243 971 823 Human adenovirus 2 isolate ADVJA-77-BE genome assembly, chromosome: ADVJA-77-BE blastn 24600 276 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;