RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA793147" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA793147 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8431269 8431269 PRJNA793147_P_NODE_54527_length_232_cov_0.883436_g54261_i0 PRJNA793147 54527 232 0.883436 2.04957152 Candidatus Saccharibacteria bacterium TM7i 2980174 Bacteria Bacteria 174 4.24e-39   NTclustered gi|2306681518|gb|CP075337.1| 2980174 g54261 i0 93.913 0.495689655172414 115 7 50 0 1 115 525647 525533 Candidatus Saccharibacteria bacterium TM7i chromosome, complete genome blastn 115 174 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium TM7i
21180766 21180766 PRJNA793147_P_NODE_60557_length_227_cov_0.911392_g60291_i0 PRJNA793147 60557 227 0.911392 2.06885984 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 180 8.89e-41   NTclustered gi|1950821269|gb|CP066696.1| 2026720 g60291 i0 85.465 4.87224669603524 172 25 76 0 1 172 490765 490936 Candidatus Saccharibacteria bacterium isolate NC_groundwater_1927_Pr3_S-0.2um_48_6 chromosome blastn 1106 180 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;