RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA792582" and tax_phylum = "Pisuviricota"

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tax_superkingdom 1

tax_phylum 1

  • Pisuviricota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA792582 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
777191 777191 PRJNA792582_P_NODE_81_length_3511_cov_72.853112_g31_i3 PRJNA792582 81 3511 72.853112 2557.87276232 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 2588 0   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g31 i3 92.877 0.859014525776132 1783 122 86 5 6 1786 7108 5329 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 3016 2588 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
2053058 2053058 PRJNA792582_P_NODE_53082_length_248_cov_0.880000_g52268_i0 PRJNA792582 53082 248 0.88 2.1824 Zebrafish picornavirus 1 2304617 Viruses Viruses 436 5.3e-118   NTclustered gi|2500378199|ref|NC_076245.1| 2304617 g52268 i0 98.394 4.69354838709677 249 2 100 2 1 248 8180 7933 Zebrafish picornavirus 1 strain IDEXX/ZfPV-1/2017/USA, complete genome blastn 1164 436 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
23730087 23730087 PRJNA792582_P_NODE_56379_length_244_cov_0.900585_g55565_i0 PRJNA792582 56379 244 0.900585 2.1974274 Zebrafish picornavirus 1 2304617 Viruses Viruses 435 1.87e-117   NTclustered gi|1812398529|gb|MN524064.1| 2304617 g55565 i0 98.77 3 244 3 100 0 1 244 5828 6071 Zebrafish picornavirus 1 isolate CZAR/ZfPV/2018/Utah/USA, complete genome blastn 732 435 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
25003702 25003702 PRJNA792582_P_NODE_80_length_3514_cov_99.854112_g31_i2 PRJNA792582 80 3514 99.854112 3508.87349568 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 2854 0   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g31 i2 95.569 0.858281161070006 1783 74 86 5 1726 3506 5329 7108 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 3016 2854 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;