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contig_metadata

19 rows where analysis = "blastn", bioproject = "PRJNA792582" and tax_phylum = "Nematoda"

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tax_superkingdom 1

tax_phylum 1

  • Nematoda · 19 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA792582 · 19 ✖

analysis 1

  • blastn · 19 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2052836 2052836 PRJNA792582_P_NODE_31922_length_306_cov_1.725322_g31108_i0 PRJNA792582 31922 306 1.725322 5.27948532 Trichinella spiralis 6334 Nematoda Nematoda 67.6 1.02e-6   NTclustered gi|339244456|ref|XM_003378106.1| 6334 g31108 i0 90.566 0.173202614379085 53 2 17 3 250 301 794 844 Trichinella spiralis ribosome production factor 1 (Tsp_02353) mRNA, complete cds blastn 53 67.6 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella spiralis
2053074 2053074 PRJNA792582_P_NODE_5442_length_707_cov_21.668770_g4703_i0 PRJNA792582 5442 707 21.66877 153.1982039 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 1245 0   NTclustered gi|2095998828|gb|MZ708958.1| 1904821 g4703 i0 98.446 2.32673267326733 708 10 100 1 1 707 7922 7215 Pseudocapillaria tomentosa mitochondrion, complete genome blastn 1645 1245 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa
3328395 3328395 PRJNA792582_P_NODE_7263_length_621_cov_4.100365_g6477_i0 PRJNA792582 7263 621 4.100365 25.46326665 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 1051 0   NTclustered gi|2095998828|gb|MZ708958.1| 1904821 g6477 i0 97.258 2.19806763285024 620 17 99 0 2 621 11439 10820 Pseudocapillaria tomentosa mitochondrion, complete genome blastn 1365 1051 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa
4605555 4605555 PRJNA792582_P_NODE_5744_length_690_cov_4.016207_g4990_i0 PRJNA792582 5744 690 4.016207 27.7118283 Trichinella spiralis 6334 Nematoda Nematoda 564 7.15e-156   NTclustered gi|339254111|ref|XM_003372231.1| 6334 g4990 i0 81.53 89.9608695652174 693 120 99 7 1 689 337 1025 Trichinella spiralis moesin/ezrin/radixin protein (Tsp_10541) mRNA, complete cds blastn 62073 564 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella spiralis
5880745 5880745 PRJNA792582_P_NODE_725_length_1666_cov_297.755807_g497_i0 PRJNA792582 725 1666 297.755807 4960.61174462 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 765 0   NTclustered gi|1070586637|gb|KU987805.1| 1904821 g497 i0 99.524 23.0228091236495 420 2 25 0 1244 1663 1 420 Pseudocapillaria tomentosa 18S ribosomal RNA gene, partial sequence blastn 38356 765 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa
5880751 5880751 PRJNA792582_P_NODE_8585_length_576_cov_5.654076_g7789_i0 PRJNA792582 8585 576 5.654076 32.56747776 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 1064 0   NTclustered gi|2095998828|gb|MZ708958.1| 1904821 g7789 i0 100 16.3784722222222 576 0 100 0 1 576 2477 1902 Pseudocapillaria tomentosa mitochondrion, complete genome blastn 9434 1064 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa
7155193 7155193 PRJNA792582_P_NODE_18766_length_397_cov_2.324074_g17952_i0 PRJNA792582 18766 397 2.324074 9.22657378 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 682 0   NTclustered gi|2095998828|gb|MZ708958.1| 1904821 g17952 i0 97.727 39.0352644836272 396 9 99 0 2 397 1233 838 Pseudocapillaria tomentosa mitochondrion, complete genome blastn 15497 682 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa
7155313 7155313 PRJNA792582_P_NODE_32886_length_301_cov_1.052632_g32072_i0 PRJNA792582 32886 301 1.052632 3.16842232 Trichinella spiralis 6334 Nematoda Nematoda 231 3.35e-56   NTclustered gi|339242972|ref|XM_003377364.1| 6334 g32072 i0 80.795 4.91694352159468 302 52 100 4 1 301 3320 3024 Trichinella spiralis ATP-dependent RNA helicase DHX8 (Tsp_01590) mRNA, complete cds blastn 1480 231 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella spiralis
8429997 8429997 PRJNA792582_P_NODE_2767_length_967_cov_8.189038_g2198_i0 PRJNA792582 2767 967 8.189038 79.18799746 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 1676 0   NTclustered gi|2095998828|gb|MZ708958.1| 1904821 g2198 i0 98.526 1.28438469493278 950 12 98 2 1 950 8024 8971 Pseudocapillaria tomentosa mitochondrion, complete genome blastn 1242 1676 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa
12256517 12256517 PRJNA792582_P_NODE_34930_length_291_cov_1.944954_g34116_i0 PRJNA792582 34930 291 1.944954 5.65981614 Trichinella spiralis 6334 Nematoda Nematoda 248 3.2e-61   NTclustered gi|339233103|ref|XM_003381621.1| 6334 g34116 i0 83.65 64.4845360824742 263 43 90 0 29 291 795 533 Trichinella spiralis syntaxin-1A (Tsp_07354) mRNA, complete cds blastn 18765 248 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella spiralis
14805373 14805373 PRJNA792582_P_NODE_18532_length_399_cov_7.407975_g17718_i0 PRJNA792582 18532 399 7.407975 29.55782025 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 726 0   NTclustered gi|2095998828|gb|MZ708958.1| 1904821 g17718 i0 99.499 40.5664160401003 399 2 100 0 1 399 2561 2959 Pseudocapillaria tomentosa mitochondrion, complete genome blastn 16186 726 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa
14805428 14805428 PRJNA792582_P_NODE_26552_length_335_cov_1.652672_g25738_i0 PRJNA792582 26552 335 1.652672 5.5364512 Trichinella spiralis 6334 Nematoda Nematoda 130 1.4199999999999999e-25   NTclustered gi|339247788|ref|XM_003375480.1| 6334 g25738 i0 81.935 0.91044776119403 155 26 46 2 1 154 3362 3515 Trichinella spiralis putative IPT/TIG domain protein (Tsp_08514) mRNA, partial cds blastn 305 130 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella spiralis
14805819 14805819 PRJNA792582_P_NODE_8672_length_574_cov_1.616766_g7876_i0 PRJNA792582 8672 574 1.616766 9.28023684 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 989 0   NTclustered gi|2095998828|gb|MZ708958.1| 1904821 g7876 i0 97.735 5.86062717770035 574 13 100 0 1 574 12805 12232 Pseudocapillaria tomentosa mitochondrion, complete genome blastn 3364 989 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa
16079315 16079315 PRJNA792582_P_NODE_20013_length_384_cov_18.713826_g19199_i0 PRJNA792582 20013 384 18.713826 71.86109184 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 710 0   NTclustered gi|1070586637|gb|KU987805.1| 1904821 g19199 i0 100 95.140625 384 0 100 0 1 384 566 949 Pseudocapillaria tomentosa 18S ribosomal RNA gene, partial sequence blastn 36534 710 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa
16079339 16079339 PRJNA792582_P_NODE_23753_length_354_cov_0.804270_g22939_i0 PRJNA792582 23753 354 0.80427 2.8471158 Trichinella spiralis 6334 Nematoda Nematoda 62.1 5.56e-5   NTclustered gi|339244456|ref|XM_003378106.1| 6334 g22939 i0 91.304 0.129943502824859 46 3 13 1 193 237 799 844 Trichinella spiralis ribosome production factor 1 (Tsp_02353) mRNA, complete cds blastn 46 62.1 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella spiralis
17355154 17355154 PRJNA792582_P_NODE_27734_length_328_cov_1.207843_g26920_i0 PRJNA792582 27734 328 1.207843 3.96172504 Trichinella spiralis 6334 Nematoda Nematoda 287 7.77e-73   NTclustered gi|339248356|ref|XM_003373118.1| 6334 g26920 i0 82.965 0.966463414634146 317 54 97 0 2 318 393 77 Trichinella spiralis neuronal calcium sensor 2 (Tsp_10012) mRNA, complete cds blastn 317 287 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella spiralis
18628383 18628383 PRJNA792582_P_NODE_215_length_2573_cov_190.748800_g132_i0 PRJNA792582 215 2573 190.7488 4907.966624 Aonchotheca paranalis 2025203 Nematoda Nematoda 508 1.32e-138   NTclustered gi|1279640587|gb|MF621021.1| 2025203 g132 i0 90.981 4.76525456665371 377 34 21 0 2197 2573 3532 3908 Aonchotheca paranalis isolate PL 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 12261 508 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Aonchotheca Aonchotheca paranalis
22454533 22454533 PRJNA792582_P_NODE_918_length_1530_cov_41.117364_g648_i0 PRJNA792582 918 1530 41.117364 629.0956692 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 2676 0   NTclustered gi|2095998828|gb|MZ708958.1| 1904821 g648 i0 98.235 43.3522875816993 1530 27 100 0 1 1530 5656 7185 Pseudocapillaria tomentosa mitochondrion, complete genome blastn 66329 2676 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa
23730147 23730147 PRJNA792582_P_NODE_8999_length_564_cov_5.606925_g8201_i0 PRJNA792582 8999 564 5.606925 31.623057 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 920 0   NTclustered gi|2095998828|gb|MZ708958.1| 1904821 g8201 i0 96.099 28.8705673758865 564 22 100 0 1 564 4878 4315 Pseudocapillaria tomentosa mitochondrion, complete genome blastn 16283 920 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;