RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA792582" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA792582 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4605150 4605150 PRJNA792582_P_NODE_20384_length_381_cov_1.818182_g19570_i0 PRJNA792582 20384 381 1.818182 6.92727342 Lobosporangium transversale 64571 Fungi Fungi 60.2 2.17e-4   NTclustered gi|1227136130|ref|XM_022023699.1| 64571 g19570 i0 100 8.58792650918635 32 0 8 0 131 162 289 320 Lobosporangium transversale hypothetical protein (BCR41DRAFT_350907), mRNA blastn 3272 60.2 1 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Lobosporangium Lobosporangium transversale
13969456 13969456 PRJNA792582_P_NODE_49751_length_251_cov_0.865169_g48937_i0 PRJNA792582 49751 251 0.865169 2.17157419 Fungi 4751 Fungi Fungi 215 2.74e-51   NTclustered gi|2324084914|ref|XM_051521800.1| 90255 g48937 i0 83.478 59.8525896414343 230 38 92 0 22 251 841 612 Cokeromyces recurvatus elongation factor 2 (BX663DRAFT_227040), mRNA blastn 15023 215 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Cokeromyces Cokeromyces recurvatus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;