RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA792582" and tax_phylum = "Microsporidia"

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tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA792582 · 6 ✖

analysis 1

  • blastn · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2491062 2491062 PRJNA792582_P_NODE_56102_length_244_cov_2.111111_g55288_i0 PRJNA792582 56102 244 2.111111 5.15111084 Fungi 4751 Fungi Fungi 183 7.479999999999997e-42   NTclustered gi|1378896647|gb|MF278562.1| 1485682 g55288 i0 95.652 59.5860655737705 115 4 47 1 43 157 5537 5650 Mitosporidium daphniae strain UGP3 small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 14539 183 1 Eukaryota Opisthokonta Fungi Microsporidia       Mitosporidium Mitosporidium daphniae
10980917 10980917 PRJNA792582_P_NODE_36609_length_286_cov_22.093897_g35795_i0 PRJNA792582 36609 286 22.093897 63.18854542 Vavraia culicis 103449 Fungi Fungi 315 3.05e-81   NTclustered gi|667636757|ref|XR_552273.1| 948595 g35795 i0 86.713 24.8041958041958 286 34 99 4 1 284 2632 2349 Vavraia culicis subsp. floridensis 28S ribosomal RNA (VCUG_02832), partial rRNA blastn 7094 315 1 Eukaryota Opisthokonta Fungi Microsporidia     Pleistophoridae Vavraia Vavraia culicis
13969155 13969155 PRJNA792582_P_NODE_1471_length_1275_cov_3.595674_g1071_i0 PRJNA792582 1471 1275 3.595674 45.8448435 Pleistophoridae 35232 Fungi Fungi 1171 0   NTclustered gi|134147422|gb|EF119339.1| 249366 g1071 i0 84.66 42.0666666666667 1206 147 93 32 92 1275 1352 2541 Pleistophora mulleri 16S ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence blastn 53635 1179 0.993214588634436 Eukaryota Opisthokonta Fungi Microsporidia     Pleistophoridae Pleistophora Pleistophora mulleri
14805350 14805350 PRJNA792582_P_NODE_14532_length_450_cov_4.819629_g13719_i0 PRJNA792582 14532 450 4.819629 21.6883305 Pseudoloma neurophilia 146866 Fungi Fungi 832 0   NTclustered gi|11993647|gb|AF322654.1| 146866 g13719 i0 100 99.08 450 0 100 0 1 450 1335 886 Pseudoloma neurophilia small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 44586 832 1 Eukaryota Opisthokonta Fungi Microsporidia       Pseudoloma Pseudoloma neurophilia
18628365 18628365 PRJNA792582_P_NODE_19495_length_389_cov_8.819620_g18681_i0 PRJNA792582 19495 389 8.81962 34.3083218 Ovipleistophora ovariae 103445 Fungi Fungi 222 2.68e-53   NTclustered gi|2017842940|gb|MW811106.1| 103445 g18681 i0 77.696 11.426735218509 408 61 100 25 1 389 1752 2148 Ovipleistophora ovariae isolate 2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 4445 222 1 Eukaryota Opisthokonta Fungi Microsporidia     Pleistophoridae Ovipleistophora Ovipleistophora ovariae
23729728 23729728 PRJNA792582_P_NODE_2319_length_1044_cov_13.728115_g1802_i0 PRJNA792582 2319 1044 13.728115 143.3215206 Pseudoloma neurophilia 146866 Fungi Fungi 1576 0   NTclustered gi|11993647|gb|AF322654.1| 146866 g1802 i0 99.651 79.2116858237548 860 3 82 0 185 1044 2 861 Pseudoloma neurophilia small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 82697 1576 1 Eukaryota Opisthokonta Fungi Microsporidia       Pseudoloma Pseudoloma neurophilia

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;