RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA792582" and tax_phylum = "Kitrinoviricota"

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tax_superkingdom 1

tax_phylum 1

  • Kitrinoviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA792582 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12256746 12256746 PRJNA792582_P_NODE_54710_length_246_cov_0.890173_g53896_i0 PRJNA792582 54710 246 0.890173 2.18982558 Pumpkin alphaendornavirus 2861712 Viruses Viruses 444 3.14e-120   NTclustered gi|2072437000|gb|MW018478.1| 2861712 g53896 i0 99.187 8.64227642276423 246 2 100 0 1 246 14757 14512 Pumpkin alphaendornavirus isolate Anhui, complete genome blastn 2126 444 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Endornaviridae Alphaendornavirus Pumpkin alphaendornavirus
25003652 25003652 PRJNA792582_P_NODE_57440_length_243_cov_0.905882_g56626_i0 PRJNA792582 57440 243 0.905882 2.20129326 Cucurbit chlorotic yellows virus 558690 Viruses Viruses 444 3.09e-120   NTclustered gi|2899224146|gb|PQ686549.1| 558690 g56626 i0 99.588 64.761316872428 243 1 100 0 1 243 4815 5057 Cucurbit chlorotic yellows virus isolate CCYV-M-NJ1 segment RNA2, complete sequence blastn 15737 444 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae Crinivirus Cucurbit chlorotic yellows virus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;