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contig_metadata

15 rows where analysis = "blastn", bioproject = "PRJNA792582" and tax_phylum = "Heterolobosea"

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tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 15 ✖

tax_clade 1

bioproject 1

  • PRJNA792582 · 15 ✖

analysis 1

  • blastn · 15 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2052704 2052704 PRJNA792582_P_NODE_13102_length_472_cov_2.631579_g12290_i0 PRJNA792582 13102 472 2.631579 12.42105288 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 771 0   NTclustered gi|11466174|ref|NC_002573.1| 5762 g12290 i0 96.186 1 472 17 100 1 1 472 615 145 Naegleria gruberi mitochondrion, complete genome blastn 472 771 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
4605459 4605459 PRJNA792582_P_NODE_5004_length_735_cov_2.672205_g4285_i0 PRJNA792582 5004 735 2.672205 19.64070675 Naegleria jadini 51636 Heterolobosea other_Eukaryota 1358 0   NTclustered gi|2438257170|gb|OP997288.1| 51636 g4285 i0 100 25.9142857142857 735 0 100 0 1 735 4283 5017 Naegleria jadini strain ITMAP400 plasmid CERE, complete sequence blastn 19047 1358 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria jadini
4605477 4605477 PRJNA792582_P_NODE_51744_length_249_cov_0.875000_g50930_i0 PRJNA792582 51744 249 0.875 2.17875 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 416 6.939999999999999e-112   NTclustered gi|290995766|ref|XM_002680408.1| 5762 g50930 i0 96.787 1 249 8 100 0 1 249 14 262 Naegleria gruberi 60S ribosomal protein L13 (NAEGRDRAFT_35692), mRNA blastn 249 416 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
5880739 5880739 PRJNA792582_P_NODE_6305_length_662_cov_3.310696_g5536_i0 PRJNA792582 6305 662 3.310696 21.91680752 Naegleria jadini 51636 Heterolobosea other_Eukaryota 1218 0   NTclustered gi|2777861737|gb|PQ072231.1| 51636 g5536 i0 99.849 97.9939577039275 662 1 100 0 1 662 570 1231 Naegleria jadini strain CCAP_1518_2_consensus_sequence small subunit ribosomal RNA gene, partial sequence blastn 64872 1218 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria jadini
10981074 10981074 PRJNA792582_P_NODE_49709_length_251_cov_0.865169_g48895_i0 PRJNA792582 49709 251 0.865169 2.17157419 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 409 1.17e-109   NTclustered gi|290983374|ref|XM_002674358.1| 5762 g48895 i0 96.016 2 251 10 100 0 1 251 465 215 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_82706), mRNA blastn 502 409 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
12256364 12256364 PRJNA792582_P_NODE_17810_length_408_cov_2.044776_g16996_i0 PRJNA792582 17810 408 2.044776 8.34268608 Naegleria australiensis 51634 Heterolobosea other_Eukaryota 708 0   NTclustered gi|38606344|gb|AY376152.1| 51634 g16996 i0 99.237 19.7794117647059 393 2 96 1 17 408 1 393 Naegleria australiensis isolate 7857 small subunit ribosomal RNA gene, partial sequence; mitochondrial blastn 8070 708 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria australiensis
13530425 13530425 PRJNA792582_P_NODE_16051_length_430_cov_1.425770_g15237_i0 PRJNA792582 16051 430 1.42577 6.130811 Naegleria jadini 51636 Heterolobosea other_Eukaryota 795 0   NTclustered gi|2438257170|gb|OP997288.1| 51636 g15237 i0 100 40.0232558139535 430 0 100 0 1 430 2794 3223 Naegleria jadini strain ITMAP400 plasmid CERE, complete sequence blastn 17210 795 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria jadini
13530819 13530819 PRJNA792582_P_NODE_56431_length_244_cov_0.900585_g55617_i0 PRJNA792582 56431 244 0.900585 2.1974274 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 206 1.6e-48   NTclustered gi|290999442|ref|XM_002682243.1| 5762 g55617 i0 91.333 0.942622950819672 150 13 61 0 72 221 1961 1812 Naegleria gruberi FYVE finger-containing phosphoinositide kinase (NAEGRDRAFT_78054), partial mRNA blastn 230 206 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
13530820 13530820 PRJNA792582_P_NODE_56531_length_244_cov_0.900585_g55717_i0 PRJNA792582 56531 244 0.900585 2.1974274 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 291 4.28e-74   NTclustered gi|290991020|ref|XM_002678088.1| 5762 g55717 i0 91.589 1.81147540983607 214 12 88 2 31 244 555 348 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_66740), partial mRNA blastn 442 291 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
16079658 16079658 PRJNA792582_P_NODE_54993_length_246_cov_0.890173_g54179_i0 PRJNA792582 54993 246 0.890173 2.18982558 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 383 6.94e-102   NTclustered gi|25986840|gb|AY122634.1| 5762 g54179 i0 94.715 5.98373983739837 246 13 100 0 1 246 1673 1428 Naegleria gruberi strain ATCC 30224 heat shock protein 90 (HSP-90) gene, partial cds blastn 1472 383 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
18628544 18628544 PRJNA792582_P_NODE_40315_length_277_cov_1.259804_g39501_i0 PRJNA792582 40315 277 1.259804 3.48965708 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 195 4e-45   NTclustered gi|290983699|ref|XM_002674520.1| 5762 g39501 i0 86.517 0.642599277978339 178 22 64 2 1 177 473 649 Naegleria gruberi rab family small GTPase (NAEGRDRAFT_80594), mRNA blastn 178 195 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
18628665 18628665 PRJNA792582_P_NODE_49215_length_252_cov_1.413408_g48401_i0 PRJNA792582 49215 252 1.413408 3.56178816 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 416 7.029999999999999e-112   NTclustered gi|290985045|ref|XM_002675191.1| 5762 g48401 i0 96.443 96.0515873015873 253 8 100 1 1 252 410 662 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_88138), mRNA blastn 24205 416 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
18628788 18628788 PRJNA792582_P_NODE_58315_length_242_cov_0.911243_g57501_i0 PRJNA792582 58315 242 0.911243 2.20520806 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 375 1.14e-99   NTclustered gi|290987254|ref|XM_002676292.1| 5762 g57501 i0 94.628 1.85537190082645 242 13 100 0 1 242 1210 1451 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_34100), partial mRNA blastn 449 375 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
21179567 21179567 PRJNA792582_P_NODE_47157_length_258_cov_1.513514_g46343_i0 PRJNA792582 47157 258 1.513514 3.90486612 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 403 5.63e-108   NTclustered gi|11466174|ref|NC_002573.1| 5762 g46343 i0 94.961 1 258 12 100 1 1 258 426 170 Naegleria gruberi mitochondrion, complete genome blastn 258 403 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
21179687 21179687 PRJNA792582_P_NODE_56597_length_244_cov_0.900585_g55783_i0 PRJNA792582 56597 244 0.900585 2.1974274 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 180 9.68e-41   NTclustered gi|290984405|ref|XM_002674872.1| 5762 g55783 i0 83.957 0.766393442622951 187 30 77 0 1 187 866 680 Naegleria gruberi PAP2_haloperoxidase domain-containing protein (NAEGRDRAFT_80466), mRNA blastn 187 180 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;