contig_metadata
14 rows where analysis = "blastn", bioproject = "PRJNA792582" and tax_phylum = "Gemmatimonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2052884 | 2052884 | PRJNA792582_P_NODE_36382_length_287_cov_1.794393_g35568_i0 | PRJNA792582 | 36382 | 287 | 1.794393 | 5.14990791 | Gemmatirosa kalamazoonensis | 861299 | Bacteria | Bacteria | 316 | 8.519999999999998e-82 | NTclustered | gi|575456455|gb|CP007128.1| | 861299 | g35568 | i0 | 87.589 | 15.6898954703833 | 282 | 24 | 98 | 3 | 3 | 283 | 35157 | 35428 | Gemmatirosa kalamazoonesis strain KBS708, complete genome | blastn | 4503 | 316 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa kalamazoonensis | |
| 3328242 | 3328242 | PRJNA792582_P_NODE_48103_length_255_cov_1.692308_g47289_i0 | PRJNA792582 | 48103 | 255 | 1.692308 | 4.3153854 | Gemmatirosa kalamazoonensis | 861299 | Bacteria | Bacteria | 244 | 3.56e-60 | NTclustered | gi|575461033|gb|CP007129.1| | 861299 | g47289 | i0 | 83.984 | 1.00392156862745 | 256 | 39 | 100 | 2 | 1 | 255 | 972283 | 972537 | Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence | blastn | 256 | 244 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa kalamazoonensis | |
| 4605354 | 4605354 | PRJNA792582_P_NODE_40124_length_277_cov_2.024510_g39310_i0 | PRJNA792582 | 40124 | 277 | 2.02451 | 5.6078927 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 178 | 4.029999999999999e-40 | NTclustered | gi|2874254163|emb|OY970395.1| | 412054 | g39310 | i0 | 81.013 | 7.86642599277978 | 237 | 34 | 84 | 10 | 34 | 266 | 3630999 | 3631228 | MAG: uncultured Gemmatimonadales bacterium isolate MFD05684.bin.c.1 genome assembly, chromosome: 1 | blastn | 2179 | 178 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 8430221 | 8430221 | PRJNA792582_P_NODE_48607_length_254_cov_1.243094_g47793_i0 | PRJNA792582 | 48607 | 254 | 1.243094 | 3.15745876 | Pseudogemmatithrix spongiicola | 3062599 | Bacteria | Bacteria | 307 | 4.4600000000000006e-79 | NTclustered | gi|2557479348|gb|CP130613.1| | 3062599 | g47793 | i0 | 88.845 | 120.807086614173 | 251 | 26 | 98 | 2 | 1 | 249 | 1553871 | 1553621 | Pseudogemmatithrix spongiicola strain 318 chromosome, complete genome | blastn | 30685 | 307 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Pseudogemmatithrix | Pseudogemmatithrix spongiicola | |
| 9705110 | 9705110 | PRJNA792582_P_NODE_19628_length_388_cov_2.704762_g18814_i0 | PRJNA792582 | 19628 | 388 | 2.704762 | 10.49447656 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 331 | 4.2500000000000004e-86 | NTclustered | gi|2874253789|emb|OY969773.1| | 412054 | g18814 | i0 | 82.443 | 156.559278350515 | 393 | 51 | 100 | 10 | 1 | 388 | 422487 | 422108 | MAG: uncultured Gemmatimonadales bacterium isolate MFD04580.bin.2.49 genome assembly, chromosome: 1 | blastn | 60745 | 331 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 9705247 | 9705247 | PRJNA792582_P_NODE_37308_length_285_cov_1.254717_g36494_i0 | PRJNA792582 | 37308 | 285 | 1.254717 | 3.57594345 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 322 | 1.82e-83 | NTclustered | gi|2874253789|emb|OY969773.1| | 412054 | g36494 | i0 | 87.018 | 9.50877192982456 | 285 | 37 | 100 | 0 | 1 | 285 | 209813 | 210097 | MAG: uncultured Gemmatimonadales bacterium isolate MFD04580.bin.2.49 genome assembly, chromosome: 1 | blastn | 2710 | 322 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 12256630 | 12256630 | PRJNA792582_P_NODE_44970_length_264_cov_1.638743_g44156_i0 | PRJNA792582 | 44970 | 264 | 1.638743 | 4.32628152 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 339 | 1.65e-88 | NTclustered | gi|2874253728|emb|OY969570.1| | 412054 | g44156 | i0 | 89.773 | 228.083333333333 | 264 | 27 | 100 | 0 | 1 | 264 | 174103 | 174366 | MAG: uncultured Gemmatimonadales bacterium isolate MFD02840.bin.c.1 genome assembly, chromosome: 1 | blastn | 60214 | 339 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 13530588 | 13530588 | PRJNA792582_P_NODE_37211_length_285_cov_1.452830_g36397_i0 | PRJNA792582 | 37211 | 285 | 1.45283 | 4.1405655 | Gemmatirosa kalamazoonensis | 861299 | Bacteria | Bacteria | 226 | 1.47e-54 | NTclustered | gi|575456455|gb|CP007128.1| | 861299 | g36397 | i0 | 81.588 | 0.971929824561404 | 277 | 47 | 96 | 4 | 4 | 278 | 4375878 | 4375604 | Gemmatirosa kalamazoonesis strain KBS708, complete genome | blastn | 277 | 226 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa kalamazoonensis | |
| 13530860 | 13530860 | PRJNA792582_P_NODE_60031_length_237_cov_2.335366_g59217_i0 | PRJNA792582 | 60031 | 237 | 2.335366 | 5.53481742 | Gemmatirosa kalamazoonensis | 861299 | Bacteria | Bacteria | 335 | 1.8899999999999996e-87 | NTclustered | gi|575456455|gb|CP007128.1| | 861299 | g59217 | i0 | 93.392 | 303.586497890295 | 227 | 14 | 96 | 1 | 1 | 227 | 3044934 | 3045159 | Gemmatirosa kalamazoonesis strain KBS708, complete genome | blastn | 71950 | 335 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa kalamazoonensis | |
| 14805596 | 14805596 | PRJNA792582_P_NODE_4252_length_794_cov_2.341193_g3570_i0 | PRJNA792582 | 4252 | 794 | 2.341193 | 18.58907242 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 1026 | 0 | NTclustered | gi|2874253978|emb|OY970303.1| | 412054 | g3570 | i0 | 90.113 | 90.9861460957179 | 799 | 66 | 100 | 12 | 1 | 794 | 3486021 | 3485231 | MAG: uncultured Gemmatimonadales bacterium isolate MFD01275.bin.c.12 genome assembly, chromosome: 1 | blastn | 72243 | 1026 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 16518474 | 16518474 | PRJNA792582_P_NODE_5393_length_711_cov_1.318182_g4655_i0 | PRJNA792582 | 5393 | 711 | 1.318182 | 9.37227402 | Gemmatimonas | 173479 | Bacteria | Bacteria | 1085 | 0 | NTclustered | gi|470475286|ref|NR_076270.1| | 173480 | g4655 | i0 | 94.468 | 116.066104078762 | 705 | 37 | 99 | 2 | 1 | 705 | 913 | 1615 | Gemmatimonas aurantiaca strain T-27 23S ribosomal RNA gene, complete sequence | blastn | 82523 | 1085 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonas | Gemmatimonas aurantiaca | |
| 19903770 | 19903770 | PRJNA792582_P_NODE_38536_length_281_cov_2.961538_g37722_i0 | PRJNA792582 | 38536 | 281 | 2.961538 | 8.32192178 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 305 | 1.8e-78 | NTclustered | gi|2874253755|emb|OY969695.1| | 412054 | g37722 | i0 | 86.713 | 50.9003558718861 | 286 | 24 | 99 | 14 | 1 | 280 | 343477 | 343754 | MAG: uncultured Gemmatimonadales bacterium isolate MFD04967.bin.1.34 genome assembly, chromosome: 1 | blastn | 14303 | 305 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 22454208 | 22454208 | PRJNA792582_P_NODE_35698_length_289_cov_1.425926_g34884_i0 | PRJNA792582 | 35698 | 289 | 1.425926 | 4.12092614 | Gemmatirosa kalamazoonensis | 861299 | Bacteria | Bacteria | 220 | 6.93e-53 | NTclustered | gi|575456455|gb|CP007128.1| | 861299 | g34884 | i0 | 87.565 | 0.667820069204152 | 193 | 20 | 66 | 4 | 97 | 288 | 3953670 | 3953859 | Gemmatirosa kalamazoonesis strain KBS708, complete genome | blastn | 193 | 220 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa kalamazoonensis | |
| 22893092 | 22893092 | PRJNA792582_P_NODE_41358_length_274_cov_1.512438_g40544_i0 | PRJNA792582 | 41358 | 274 | 1.512438 | 4.14408012 | Gemmatirosa | 1706036 | Bacteria | Bacteria | 267 | 8.26e-67 | NTclustered | gi|2874253789|emb|OY969773.1| | 412054 | g40544 | i0 | 84.871 | 71.6021897810219 | 271 | 33 | 97 | 8 | 1 | 267 | 420781 | 421047 | MAG: uncultured Gemmatimonadales bacterium isolate MFD04580.bin.2.49 genome assembly, chromosome: 1 | blastn | 19619 | 267 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;