RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJNA792582" and tax_phylum = "Evosea"

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tax_superkingdom 1

tax_phylum 1

  • Evosea · 5 ✖

tax_clade 1

bioproject 1

  • PRJNA792582 · 5 ✖

analysis 1

  • blastn · 5 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3327970 3327970 PRJNA792582_P_NODE_18243_length_403_cov_1.290909_g17429_i0 PRJNA792582 18243 403 1.290909 5.20236327 Polyschismium peyerimhoffii 2911783 Evosea other_Eukaryota 276 2.11e-69   NTclustered gi|2161226355|gb|MZ313553.1| 2911783 g17429 i0 88.066 36.1712158808933 243 16 58 11 142 376 6800 6563 Polyschismium peyerimhoffii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 14577 276 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Didymiaceae Polyschismium Polyschismium peyerimhoffii
9705127 9705127 PRJNA792582_P_NODE_21348_length_373_cov_1.003333_g20534_i0 PRJNA792582 21348 373 1.003333 3.74243209 Telaepolella tubasferens 1346289 Evosea other_Eukaryota 431 3.9e-116   NTclustered gi|167859711|gb|EU273435.1| 1346289 g20534 i0 88.219 99.4343163538874 365 38 98 5 1 365 360 1 Telaepolella tubasferens clone 1 actin gene, partial cds blastn 37089 431 1 Eukaryota Amoebozoa   Evosea Variosea   Flamellidae Telaepolella Telaepolella tubasferens
16079368 16079368 PRJNA792582_P_NODE_27433_length_330_cov_1.186770_g26619_i0 PRJNA792582 27433 330 1.18677 3.916341 Arcyria sp. 'tenuissima' 3129282 Evosea other_Eukaryota 337 7.66e-88   NTclustered gi|2698738389|gb|PP491458.1| 3129282 g26619 i0 85.196 38.4787878787879 331 46 100 2 1 330 703 1031 Arcyria sp. 'tenuissima' voucher sc32644 internal transcribed spacer region, partial sequence blastn 12698 337 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Trichiida Trichiidae Arcyria Arcyria sp. 'tenuissima'
22454145 22454145 PRJNA792582_P_NODE_27398_length_330_cov_1.435798_g26584_i0 PRJNA792582 27398 330 1.435798 4.7381334 Heterostelium album 2086695 Evosea other_Eukaryota 67.6 1.11e-6   NTclustered gi|1160569142|ref|XM_020571968.1| 670386 g26584 i0 97.436 1.65757575757576 39 1 12 0 114 152 42 80 Polysphondylium pallidum PN500 hypothetical protein partial mRNA blastn 547 67.6 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
23729696 23729696 PRJNA792582_P_NODE_17759_length_409_cov_1.166667_g16945_i0 PRJNA792582 17759 409 1.166667 4.77166803 Didymium spongiosum 289992 Evosea other_Eukaryota 326 2.1e-84   NTclustered gi|2161226356|gb|MZ313554.1| 289992 g16945 i0 83.607 6.60880195599022 366 41 86 16 42 394 7194 7553 Mucilago crustacea 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 2703 326 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Didymiaceae Didymium Didymium spongiosum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;