RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA792582" and tax_phylum = "Cossaviricota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Cossaviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA792582 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
776719 776719 PRJNA792582_P_NODE_13641_length_464_cov_0.913043_g12829_i0 PRJNA792582 13641 464 0.913043 4.23651952 Betapolyomavirus macacae 1891767 Viruses Viruses 183 1.53e-41   NTclustered gi|156598992|gb|EF579658.1| 1891767 g12829 i0 83.744 0.4375 203 24 44 4 252 454 2675 2482 Simian virus 40 isolate SV40(Ad)191, complete genome blastn 203 183 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Sepolyvirales Polyomaviridae Betapolyomavirus Betapolyomavirus macacae
13530731 13530731 PRJNA792582_P_NODE_49151_length_252_cov_1.692737_g48337_i0 PRJNA792582 49151 252 1.692737 4.26569724 Betapolyomavirus macacae 1891767 Viruses Viruses 178 3.61e-40   NTclustered gi|156598992|gb|EF579658.1| 1891767 g48337 i0 83.756 0.781746031746032 197 23 78 4 1 197 2673 2486 Simian virus 40 isolate SV40(Ad)191, complete genome blastn 197 178 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Sepolyvirales Polyomaviridae Betapolyomavirus Betapolyomavirus macacae

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;