RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

10 rows where analysis = "blastn", bioproject = "PRJNA792582" and tax_phylum = "Cnidaria"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 10 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA792582 · 10 ✖

analysis 1

  • blastn · 10 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
776861 776861 PRJNA792582_P_NODE_32721_length_302_cov_0.855895_g31907_i0 PRJNA792582 32721 302 0.855895 2.5848029 Actinia equina 6106 Cnidaria other_Eukaryota 379 1.14e-100   NTclustered gi|76262440|gb|DQ159069.1| 6106 g31907 i0 89.369 7.94701986754967 301 32 99 0 1 301 467 167 Actinia equina blue chromoprotein aeCP597 mRNA, complete cds blastn 2400 379 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Actinia Actinia equina
777071 777071 PRJNA792582_P_NODE_51281_length_249_cov_3.107955_g50467_i0 PRJNA792582 51281 249 3.107955 7.73880795 Actinia equina 6106 Cnidaria other_Eukaryota 285 2.0399999999999997e-72   NTclustered gi|76262440|gb|DQ159069.1| 6106 g50467 i0 87.449 3.8714859437751 247 31 99 0 1 247 396 642 Actinia equina blue chromoprotein aeCP597 mRNA, complete cds blastn 964 285 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Actinia Actinia equina
3328001 3328001 PRJNA792582_P_NODE_23443_length_356_cov_1.356890_g22629_i0 PRJNA792582 23443 356 1.35689 4.8305284 Actinia equina 6106 Cnidaria other_Eukaryota 392 1.7499999999999995e-104   NTclustered gi|76262440|gb|DQ159069.1| 6106 g22629 i0 86.686 5.78932584269663 353 47 99 0 3 355 600 248 Actinia equina blue chromoprotein aeCP597 mRNA, complete cds blastn 2061 392 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Actinia Actinia equina
7155154 7155154 PRJNA792582_P_NODE_12586_length_481_cov_2.622549_g11774_i0 PRJNA792582 12586 481 2.622549 12.61446069 Myxobolus wulii 649408 Cnidaria other_Eukaryota 137 1.26e-27   NTclustered gi|2692952329|ref|NC_086768.1| 649408 g11774 i0 75.658 0.632016632016632 304 59 61 13 184 475 6171 6471 Myxobolus wulii isolate C1 complete mitochondrial genome blastn 304 137 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Myxobolidae Myxobolus Myxobolus wulii
11419253 11419253 PRJNA792582_P_NODE_27329_length_330_cov_2.836576_g26515_i0 PRJNA792582 27329 330 2.836576 9.3607008 Myxobolus 35588 Cnidaria other_Eukaryota 176 1.77e-39   NTclustered gi|2663986577|emb|OY756918.1| 59785 g26515 i0 90.84 34.6939393939394 131 12 40 0 1 131 6426 6556 Myxobolus squamalis isolate 71B08 genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 28S rRNA complete sequences blastn 11449 176 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Myxobolidae Myxobolus Myxobolus squamalis
13530422 13530422 PRJNA792582_P_NODE_15831_length_433_cov_1.636111_g15017_i0 PRJNA792582 15831 433 1.636111 7.08436063 Myxidium streisingeri 1542451 Cnidaria other_Eukaryota 789 0   NTclustered gi|681870004|gb|KM001687.1| 1542451 g15017 i0 99.538 35.8221709006928 433 2 100 0 1 433 1210 778 Myxidium streisingeri clone ZF12 18S small subunit ribosomal RNA gene, partial sequence blastn 15511 789 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Myxidiidae Myxidium Myxidium streisingeri
14805621 14805621 PRJNA792582_P_NODE_44892_length_264_cov_2.272251_g44078_i0 PRJNA792582 44892 264 2.272251 5.99874264 Dendronephthya gigantea 151771 Cnidaria other_Eukaryota 52.8 0.024   NTclustered gi|1603815660|ref|XM_028556383.1| 151771 g44078 i0 100 0.106060606060606 28 0 11 0 38 65 2866 2839 PREDICTED: Dendronephthya gigantea uncharacterized LOC114535004 (LOC114535004), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Nephtheidae Dendronephthya Dendronephthya gigantea
17355258 17355258 PRJNA792582_P_NODE_38014_length_283_cov_1.357143_g37200_i0 PRJNA792582 38014 283 1.357143 3.84071469 Acropora muricata 159855 Cnidaria other_Eukaryota 54.7 0.007   NTclustered gi|2784710515|ref|XR_010871289.1| 159855 g37200 i0 92.105 0.134275618374558 38 3 13 0 1 38 569 532 PREDICTED: Acropora muricata uncharacterized lncRNA (LOC136917055), ncRNA blastn 38 54.7 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Acroporidae Acropora Acropora muricata
21179248 21179248 PRJNA792582_P_NODE_1277_length_1355_cov_3.477379_g919_i0 PRJNA792582 1277 1355 3.477379 47.11848545 Thelohanellus kitauei 669202 Cnidaria other_Eukaryota 91.6 2.94e-13   NTclustered gi|2692952344|ref|NC_086769.1| 669202 g919 i0 76.316 0.140221402214022 190 34 14 8 591 773 547 732 Thelohanellus kitauei isolate A1 complete mitochondrial genome blastn 190 91.6 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Myxobolidae Thelohanellus Thelohanellus kitauei
25003267 25003267 PRJNA792582_P_NODE_1840_length_1156_cov_4.669437_g1393_i0 PRJNA792582 1840 1156 4.669437 53.97869172 Myxobolus squamalis 59785 Cnidaria other_Eukaryota 58.4 0.003   NTclustered gi|1519156033|gb|MK087050.1| 59785 g1393 i0 100 0.130622837370242 31 0 3 0 144 174 13174 13204 Myxobolus squamalis mitochondrion, complete genome blastn 151 58.4 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Myxobolidae Myxobolus Myxobolus squamalis

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;