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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA792582" and tax_clade = "delta/epsilon subdivisions"

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tax_superkingdom 1

tax_clade 1

  • delta/epsilon subdivisions · 7 ✖

bioproject 1

  • PRJNA792582 · 7 ✖

analysis 1

  • blastn · 7 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
776895 776895 PRJNA792582_P_NODE_35901_length_288_cov_2.548837_g35087_i0 PRJNA792582 35901 288 2.548837 7.34065056 uncultured delta proteobacterium HF0070_10I02 710824 Bacteria Bacteria 211 4.1500000000000002e-50   NTclustered gi|297181000|gb|GU474857.1| 710824 g35087 i0 82.213 294.048611111111 253 38 87 4 37 287 6428 6181 Uncultured delta proteobacterium HF0070_10I02 genomic sequence blastn 84686 211 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       uncultured delta proteobacterium HF0070_10I02
7155274 7155274 PRJNA792582_P_NODE_2906_length_946_cov_1.939290_g2326_i0 PRJNA792582 2906 946 1.93929 18.3456834 uncultured delta proteobacterium HF0070_10I02 710824 Bacteria Bacteria 710 0   NTclustered gi|297181000|gb|GU474857.1| 710824 g2326 i0 80.781 252.305496828753 947 149 98 29 18 946 7196 8127 Uncultured delta proteobacterium HF0070_10I02 genomic sequence blastn 238681 710 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       uncultured delta proteobacterium HF0070_10I02
8430166 8430166 PRJNA792582_P_NODE_44067_length_266_cov_4.777202_g43253_i0 PRJNA792582 44067 266 4.777202 12.70735732 uncultured delta proteobacterium HF0070_10I02 710824 Bacteria Bacteria 300 7.87e-77   NTclustered gi|297181000|gb|GU474857.1| 710824 g43253 i0 87.597 258.067669172932 258 32 97 0 9 266 9088 8831 Uncultured delta proteobacterium HF0070_10I02 genomic sequence blastn 68646 300 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       uncultured delta proteobacterium HF0070_10I02
9705407 9705407 PRJNA792582_P_NODE_52788_length_248_cov_0.880000_g51974_i0 PRJNA792582 52788 248 0.88 2.1824 uncultured delta proteobacterium 34034 Bacteria Bacteria 224 4.489999999999999e-54   NTclustered gi|374854163|dbj|AP011765.1| 34034 g51974 i0 83.607 187.947580645161 244 35 98 4 7 248 15063 14823 Uncultured delta proteobacterium DNA, fosmid clone: JFF046_H12 blastn 46611 224 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       uncultured delta proteobacterium
12256483 12256483 PRJNA792582_P_NODE_3230_length_901_cov_5.836957_g2616_i0 PRJNA792582 3230 901 5.836957 52.59098257 uncultured delta proteobacterium 34034 Bacteria Bacteria 859 0   NTclustered gi|374854163|dbj|AP011765.1| 34034 g2616 i0 84.066 139.945615982242 910 126 100 15 1 901 13080 13979 Uncultured delta proteobacterium DNA, fosmid clone: JFF046_H12 blastn 126091 859 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       uncultured delta proteobacterium
12256817 12256817 PRJNA792582_P_NODE_8010_length_595_cov_1.264368_g7216_i0 PRJNA792582 8010 595 1.264368 7.5229896 Microvenator marinus 2600177 Bacteria Bacteria 558 2.84e-154   NTclustered gi|1722470586|gb|CP042467.1| 2600177 g7216 i0 85.958 184.536134453782 527 68 88 5 3 526 703602 703079 Microvenator marinus strain V1718 chromosome, complete genome blastn 109799 558 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria Bradymonadales Microvenatoraceae Microvenator Microvenator marinus
25003668 25003668 PRJNA792582_P_NODE_59080_length_241_cov_1.375000_g58266_i0 PRJNA792582 59080 241 1.375 3.31375 uncultured delta proteobacterium HF0200_19J16 710831 Bacteria Bacteria 89.8 1.65e-13   NTclustered gi|297181813|gb|GU474879.1| 710831 g58266 i0 84.615 0.75103734439834 91 12 37 2 2 91 15878 15967 Uncultured delta proteobacterium HF0200_19J16 genomic sequence blastn 181 89.8 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       uncultured delta proteobacterium HF0200_19J16

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;