RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA789095" and tax_phylum = "Porifera"

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tax_superkingdom 1

tax_phylum 1

  • Porifera · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA789095 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9700043 9700043 PRJNA789095_P_NODE_79248_length_227_cov_5.253247_g77914_i0 PRJNA789095 79248 227 5.253247 11.92487069 Halichondria panicea 6063 Porifera other_Eukaryota 176 1.15e-39   NTclustered gi|2719018713|ref|XM_064543051.1| 6063 g77914 i0 84.358 22.7180616740088 179 28 79 0 2 180 420 598 PREDICTED: Halichondria panicea protein transport protein Sec61 subunit alpha (LOC135345624), mRNA blastn 5157 176 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Suberitida Halichondriidae Halichondria Halichondria panicea
24997759 24997759 PRJNA789095_P_NODE_63560_length_255_cov_4.313187_g62226_i0 PRJNA789095 63560 255 4.313187 10.99862685 Oscarella lobularis 121494 Porifera other_Eukaryota 54.7 0.006   NTclustered gi|2746760736|ref|XM_065984368.1| 121494 g62226 i0 100 0.337254901960784 29 0 11 0 45 73 506 478 PREDICTED: Oscarella lobularis spliceosome-associated protein CWC15 homolog (LOC136195096), transcript variant X2, mRNA blastn 86 54.7 1 Eukaryota Opisthokonta Metazoa Porifera Homoscleromorpha Homosclerophorida Oscarellidae Oscarella Oscarella lobularis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;