RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA789095" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA789095 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2489974 2489974 PRJNA789095_P_NODE_60582_length_262_cov_1.629630_g59248_i0 PRJNA789095 60582 262 1.62963 4.2696306 Acropora 6127 Cnidaria other_Eukaryota 93.5 1.41e-14   NTclustered gi|2113996306|ref|XM_029346466.2| 45264 g59248 i0 80.833 17.1603053435114 120 21 45 2 141 259 264 146 PREDICTED: Acropora millepora 26S proteasome complex subunit SEM1-like (LOC114966557), mRNA blastn 4496 93.5 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Acroporidae Acropora Acropora millepora
4598667 4598667 PRJNA789095_P_NODE_34404_length_350_cov_7.014440_g33070_i0 PRJNA789095 34404 350 7.01444 24.55054 Eunicella cavolini 317547 Cnidaria other_Eukaryota 56.5 0.003   NTclustered gi|2918369539|emb|OZ237721.1| 317547 g33070 i0 96.97 0.0942857142857143 33 1 9 0 82 114 11972730 11972698 Eunicella cavolini genome assembly, chromosome: 5 blastn 33 56.5 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Eunicellidae Eunicella Eunicella cavolini
4598914 4598914 PRJNA789095_P_NODE_42184_length_310_cov_2.945148_g40850_i0 PRJNA789095 42184 310 2.945148 9.1299588 Xenia sp. Carnegie-2017 2897299 Cnidaria other_Eukaryota 126 1.68e-24   NTclustered gi|2202604414|ref|XM_047006313.1| 2897299 g40850 i0 82.759 26.6129032258065 145 21 46 4 3 145 2612 2754 PREDICTED: Xenia sp. Carnegie-2017 pumilio homolog 2-like (LOC124455658), transcript variant X3, mRNA blastn 8250 126 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Xeniidae Xenia Xenia sp. Carnegie-2017
22448630 22448630 PRJNA789095_P_NODE_63338_length_256_cov_1.677596_g62004_i0 PRJNA789095 63338 256 1.677596 4.29464576 Dendronephthya gigantea 151771 Cnidaria other_Eukaryota 165 2.87e-36   NTclustered gi|1603776320|ref|XM_028535371.1| 151771 g62004 i0 78.74 22.390625 254 48 98 6 1 251 526 776 PREDICTED: Dendronephthya gigantea succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial-like (LOC114516023), mRNA blastn 5732 165 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Nephtheidae Dendronephthya Dendronephthya gigantea

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;