RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA789095" and tax_kingdom = "Fusobacteriati"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Fusobacteriati · 7 ✖

bioproject 1

  • PRJNA789095 · 7 ✖

analysis 1

  • blastn · 7 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4598867 4598867 PRJNA789095_P_NODE_40624_length_312_cov_1.891213_g39290_i0 PRJNA789095 40624 312 1.891213 5.90058456 Leptotrichia sp. oral taxon 212 712357 Bacteria Bacteria 544 3.95e-150   NTclustered gi|922689899|gb|CP012410.1| 712357 g39290 i0 98.077 101.929487179487 312 6 100 0 1 312 52088 51777 Leptotrichia sp. oral taxon 212 strain W10393, complete genome blastn 31802 544 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Leptotrichiaceae Leptotrichia Leptotrichia sp. oral taxon 212
4599946 4599946 PRJNA789095_P_NODE_74504_length_242_cov_0.911243_g73170_i0 PRJNA789095 74504 242 0.911243 2.20520806 Leptotrichia sp. oral taxon 212 712357 Bacteria Bacteria 337 5.37e-88   NTclustered gi|922689899|gb|CP012410.1| 712357 g73170 i0 91.736 1 242 20 100 0 1 242 1067354 1067595 Leptotrichia sp. oral taxon 212 strain W10393, complete genome blastn 242 337 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Leptotrichiaceae Leptotrichia Leptotrichia sp. oral taxon 212
5042725 5042725 PRJNA789095_P_NODE_38544_length_324_cov_1.374502_g37210_i0 PRJNA789095 38544 324 1.374502 4.45338648 Fusobacterium 848 Bacteria Bacteria 593 4.0299999999999986e-165   NTclustered gi|2706506546|gb|CP084156.1| 76857 g37210 i0 99.691 243.089506172839 324 1 100 0 1 324 1331989 1331666 Fusobacterium polymorphum strain KCOM2510 chromosome blastn 78761 593 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Fusobacterium Fusobacterium polymorphum
9699939 9699939 PRJNA789095_P_NODE_75648_length_241_cov_0.916667_g74314_i0 PRJNA789095 75648 241 0.916667 2.20916747 Leptotrichia hongkongensis 554406 Bacteria Bacteria 401 1.8699999999999993e-107   NTclustered gi|1708587163|dbj|AP019846.1| 554406 g74314 i0 97.083 5.43983402489627 240 4 99 3 3 241 146240 146003 Leptotrichia hongkongensis JMUB5056 DNA, complete genome blastn 1311 401 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Leptotrichiaceae Leptotrichia Leptotrichia hongkongensis
19066142 19066142 PRJNA789095_P_NODE_15735_length_675_cov_4.352159_g14438_i0 PRJNA789095 15735 675 4.352159 29.37707325 Fusobacterium 848 Bacteria Bacteria 1247 0   NTclustered gi|2706069597|gb|CP077108.1| 76857 g14438 i0 100 480 675 0 100 0 1 675 1185533 1186207 Fusobacterium polymorphum strain KCOM1281 chromosome, complete genome blastn 324000 1247 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Fusobacterium Fusobacterium polymorphum
23722647 23722647 PRJNA789095_P_NODE_13839_length_759_cov_2.374636_g12590_i0 PRJNA789095 13839 759 2.374636 18.02348724 Leptotrichia sp. oral taxon 212 712357 Bacteria Bacteria 1397 0   NTclustered gi|922689899|gb|CP012410.1| 712357 g12590 i0 99.868 482.936758893281 759 1 100 0 1 759 53074 52316 Leptotrichia sp. oral taxon 212 strain W10393, complete genome blastn 366549 1397 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Leptotrichiaceae Leptotrichia Leptotrichia sp. oral taxon 212
24996695 24996695 PRJNA789095_P_NODE_28160_length_408_cov_1.880597_g26828_i0 PRJNA789095 28160 408 1.880597 7.67283576 Leptotrichia sp. oral taxon 212 712357 Bacteria Bacteria 745 0   NTclustered gi|922689899|gb|CP012410.1| 712357 g26828 i0 99.754 455.213235294118 406 1 99 0 3 408 53987 53582 Leptotrichia sp. oral taxon 212 strain W10393, complete genome blastn 185727 745 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Leptotrichiaceae Leptotrichia Leptotrichia sp. oral taxon 212

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;