RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA788929" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA788929 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8867330 8867330 PRJNA788929_P_NODE_24187_length_326_cov_35.719368_g23526_i0 PRJNA788929 24187 326 35.719368 116.44513968 Eurotatoria 2816136 Rotifera other_Eukaryota 449 9.299999999999997e-122   NTclustered gi|72153762|gb|DQ089743.1| 231624 g23526 i0 94.257 51.1134969325153 296 14 90 2 23 316 1896 2190 Rotaria rotatoria 28S ribosomal RNA gene, partial sequence blastn 16663 449 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria rotatoria
22446684 22446684 PRJNA788929_P_NODE_3138_length_1173_cov_160.490000_g2744_i0 PRJNA788929 3138 1173 160.49 1882.5477 Asplanchna sp. 3231738 Rotifera other_Eukaryota 433 3.6599999999999996e-116   NTclustered gi|2778092479|gb|PP988071.1| 3231738 g2744 i0 75.556 14.0571184995737 1035 170 85 72 24 1018 2406 1415 Asplanchna sp. chromosome I mitochondrion, complete sequence blastn 16489 433 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Asplanchnidae Asplanchna Asplanchna sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;