contig_metadata
9 rows where analysis = "blastn", bioproject = "PRJNA788929" and tax_phylum = "Oomycota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 769006 | 769006 | PRJNA788929_P_NODE_10821_length_537_cov_18.424569_g10168_i0 | PRJNA788929 | 10821 | 537 | 18.424569 | 98.93993553 | Pythium monospermum | 92964 | SAR_Eukaryotes | SAR_Eukaryotes | 789 | 0 | NTclustered | gi|33520250|gb|AY273995.1| | 92964 | g10168 | i0 | 98.441 | 92.4320297951583 | 449 | 6 | 84 | 1 | 1 | 449 | 448 | 1 | Pythium monospermum large subunit ribosomal RNA gene, partial sequence | blastn | 49636 | 789 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Pythiales | Pythiaceae | Pythium | Pythium monospermum | ||
| 2045535 | 2045535 | PRJNA788929_P_NODE_45742_length_225_cov_11.322368_g45081_i0 | PRJNA788929 | 45742 | 225 | 11.322368 | 25.475328 | Aphanomyces astaci | 112090 | SAR_Eukaryotes | SAR_Eukaryotes | 359 | 1.0499999999999999e-94 | NTclustered | gi|1111669722|ref|NC_032051.1| | 112090 | g45081 | i0 | 98.522 | 97.8488888888889 | 203 | 3 | 90 | 0 | 2 | 204 | 3844 | 3642 | Aphanomyces astaci isolate AP03 mitochondrion, complete genome | blastn | 22016 | 359 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces astaci | ||
| 4597853 | 4597853 | PRJNA788929_P_NODE_46444_length_221_cov_5.621622_g45783_i0 | PRJNA788929 | 46444 | 221 | 5.621622 | 12.42378462 | Thraustotheca clavata | 74557 | SAR_Eukaryotes | SAR_Eukaryotes | 128 | 3.16e-25 | NTclustered | gi|533310373|ref|NC_022179.1| | 74557 | g45783 | i0 | 84.211 | 12.420814479638 | 133 | 19 | 60 | 2 | 60 | 191 | 4965 | 5096 | Thraustotheca clavata mitochondrion, complete genome | blastn | 2745 | 128 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Achlyaceae | Thraustotheca | Thraustotheca clavata | ||
| 7147837 | 7147837 | PRJNA788929_P_NODE_2926_length_1222_cov_47.370757_g2551_i0 | PRJNA788929 | 2926 | 1222 | 47.370757 | 578.87065054 | Pythium insidiosum | 114742 | SAR_Eukaryotes | SAR_Eukaryotes | 1938 | 0 | NTclustered | gi|937408816|ref|NC_027966.1| | 114742 | g2551 | i0 | 95.775 | 102.805237315876 | 1207 | 42 | 98 | 5 | 25 | 1222 | 11635 | 10429 | Pythium insidiosum mitochondrial DNA, complete genome | blastn | 125628 | 1938 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Pythiales | Pythiaceae | Pythium | Pythium insidiosum | ||
| 9697741 | 9697741 | PRJNA788929_P_NODE_34908_length_263_cov_7.463158_g34247_i0 | PRJNA788929 | 34908 | 263 | 7.463158 | 19.62810554 | Saprolegnia ferax | 4770 | SAR_Eukaryotes | SAR_Eukaryotes | 427 | 3.41e-115 | NTclustered | gi|50261276|ref|NC_005984.1| | 4770 | g34247 | i0 | 98.361 | 98.4828897338403 | 244 | 2 | 92 | 1 | 22 | 263 | 9338 | 9581 | Saprolegnia ferax mitochondrion, complete genome | blastn | 25901 | 427 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Saprolegniaceae | Saprolegnia | Saprolegnia ferax | ||
| 12693844 | 12693844 | PRJNA788929_P_NODE_20570_length_360_cov_6.797909_g19910_i0 | PRJNA788929 | 20570 | 360 | 6.797909 | 24.4724724 | Hyaloperonospora | 184462 | SAR_Eukaryotes | SAR_Eukaryotes | 217 | 1.14e-51 | NTclustered | gi|33520224|gb|AY273969.1| | 123356 | g19910 | i0 | 94.928 | 39.7361111111111 | 138 | 7 | 38 | 0 | 26 | 163 | 404 | 541 | Hyaloperonospora parasitica large subunit ribosomal RNA gene, partial sequence | blastn | 14305 | 219 | 0.990867579908676 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Hyaloperonospora | Hyaloperonospora parasitica | ||
| 16517008 | 16517008 | PRJNA788929_P_NODE_12173_length_498_cov_11.847059_g11516_i0 | PRJNA788929 | 12173 | 498 | 11.847059 | 58.99835382 | Aphanomyces | 100860 | SAR_Eukaryotes | SAR_Eukaryotes | 584 | 3.879999999999999e-162 | NTclustered | gi|1111669722|ref|NC_032051.1| | 112090 | g11516 | i0 | 90.044 | 52.8895582329317 | 452 | 43 | 91 | 2 | 48 | 498 | 41411 | 41861 | Aphanomyces astaci isolate AP03 mitochondrion, complete genome | blastn | 26339 | 584 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces astaci | ||
| 19896178 | 19896178 | PRJNA788929_P_NODE_29576_length_290_cov_19.281106_g28915_i0 | PRJNA788929 | 29576 | 290 | 19.281106 | 55.9152074 | Aphanomyces laevis | 112092 | SAR_Eukaryotes | SAR_Eukaryotes | 496 | 1.03e-135 | NTclustered | gi|17224981|gb|AF320584.1| | 112092 | g28915 | i0 | 100 | 92.8275862068966 | 268 | 0 | 92 | 0 | 1 | 268 | 990 | 723 | Aphanomyces laevis 28S ribosomal RNA gene, partial sequence | blastn | 26920 | 496 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces laevis | ||
| 19896573 | 19896573 | PRJNA788929_P_NODE_8456_length_632_cov_24.334526_g7808_i0 | PRJNA788929 | 8456 | 632 | 24.334526 | 153.79420432 | Phytophthora andina | 283009 | SAR_Eukaryotes | SAR_Eukaryotes | 272 | 4.419999999999999e-68 | NTclustered | gi|334701739|ref|NC_015619.1| | 283009 | g7808 | i0 | 77.874 | 72.9382911392405 | 461 | 86 | 72 | 13 | 118 | 570 | 21819 | 22271 | Phytophthora andina mitochondrion, complete genome | blastn | 46097 | 272 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora andina |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;