RNAquarium Metadata Server
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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA788929" and tax_phylum = "Evosea"

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tax_superkingdom 1

tax_phylum 1

  • Evosea · 8 ✖

tax_clade 1

bioproject 1

  • PRJNA788929 · 8 ✖

analysis 1

  • blastn · 8 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4597543 4597543 PRJNA788929_P_NODE_25564_length_316_cov_12.259259_g24903_i0 PRJNA788929 25564 316 12.259259 38.73925844 Physarum polycephalum 5791 Evosea other_Eukaryota 390 5.5199999999999996e-104   NTclustered gi|161209|gb|M21501.1|SLMACT5 5791 g24903 i0 93.536 76.4113924050633 263 16 83 1 54 316 24 285 P.polycephalum actin (Ppa5) mRNA, complete cds blastn 24146 390 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum polycephalum
4597830 4597830 PRJNA788929_P_NODE_44364_length_232_cov_7.031447_g43703_i0 PRJNA788929 44364 232 7.031447 16.31295704 Phalansterium filosum 857046 Evosea other_Eukaryota 108 4.37e-19   NTclustered gi|300078501|gb|GU001163.1| 857046 g43703 i0 93.151 28.0301724137931 73 5 31 0 1 73 3100 3028 Phalansterium sp. EEG-2010/THA 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 6503 108 1 Eukaryota Amoebozoa   Evosea Variosea     Phalansterium Phalansterium filosum
7147653 7147653 PRJNA788929_P_NODE_16986_length_403_cov_81.739394_g16327_i0 PRJNA788929 16986 403 81.739394 329.40975782 Polyschismium peyerimhoffii 2911783 Evosea other_Eukaryota 285 3.5e-72   NTclustered gi|2161226355|gb|MZ313553.1| 2911783 g16327 i0 82.682 29.5037220843672 358 27 83 26 56 390 6687 7032 Polyschismium peyerimhoffii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 11890 285 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Didymiaceae Polyschismium Polyschismium peyerimhoffii
7148259 7148259 PRJNA788929_P_NODE_9306_length_594_cov_55.479846_g8655_i0 PRJNA788929 9306 594 55.479846 329.55028524 Didymium spongiosum 289992 Evosea other_Eukaryota 422 3.89e-113   NTclustered gi|2161226356|gb|MZ313554.1| 289992 g8655 i0 90.184 23.1043771043771 326 28 73 3 247 570 7850 7527 Mucilago crustacea 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 13724 422 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Didymiaceae Didymium Didymium spongiosum
11418134 11418134 PRJNA788929_P_NODE_20949_length_356_cov_18.293286_g20289_i0 PRJNA788929 20949 356 18.293286 65.12409816 Didymium 5792 Evosea other_Eukaryota 616 9.53e-172   NTclustered gi|25989341|gb|AY062881.1| 181200 g20289 i0 100 86.2303370786517 333 0 94 0 24 356 841 1173 Hyperamoeba dachnaya small subunit ribosomal RNA gene, partial sequence blastn 30698 616 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Didymiaceae Didymium Didymium dachnayum
11418382 11418382 PRJNA788929_P_NODE_8669_length_621_cov_61.346715_g8019_i0 PRJNA788929 8669 621 61.346715 380.96310015 Physariida 5789 Evosea other_Eukaryota 564 6.4e-156   NTclustered gi|3221|emb|V01159.1| 5791 g8019 i0 84.193 27.4347826086957 601 74 95 19 11 598 3201 2609 Physarum polycephalum gene encoding 5.8S rRNA and 26S rRNA blastn 17037 569 0.991212653778559 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum polycephalum
18620568 18620568 PRJNA788929_P_NODE_12155_length_498_cov_33.044706_g11498_i0 PRJNA788929 12155 498 33.044706 164.56263588 Didymium iridis 5793 Evosea other_Eukaryota 106 3.68e-18   NTclustered gi|2687|emb|X60210.1| 5793 g11498 i0 77.033 7.50401606425703 209 33 42 9 1 207 5054 5249 D.iridis LSU rRNA gene blastn 3737 106 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Didymiaceae Didymium Didymium iridis
18620746 18620746 PRJNA788929_P_NODE_22795_length_339_cov_7.078947_g22134_i0 PRJNA788929 22795 339 7.078947 23.99763033 Phalansterium filosum 857046 Evosea other_Eukaryota 135 3.0900000000000003e-27   NTclustered gi|300078501|gb|GU001163.1| 857046 g22134 i0 89.72 29.8407079646018 107 10 51 1 228 334 3046 3151 Phalansterium sp. EEG-2010/THA 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 10116 135 1 Eukaryota Amoebozoa   Evosea Variosea     Phalansterium Phalansterium filosum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;