contig_metadata
8 rows where analysis = "blastn", bioproject = "PRJNA788929" and tax_phylum = "Chloroflexota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4597501 | 4597501 | PRJNA788929_P_NODE_23164_length_335_cov_29.683206_g22503_i0 | PRJNA788929 | 23164 | 335 | 29.683206 | 99.4387401 | Phototrophicaceae bacterium | 3069543 | Bacteria | Bacteria | 189 | 2.31e-43 | NTclustered | gi|2893358443|emb|OZ220735.1| | 3069543 | g22503 | i0 | 78.233 | 121.185074626866 | 317 | 53 | 92 | 11 | 22 | 330 | 2360761 | 2360453 | MAG: Phototrophicaceae bacterium isolate 252cb3c6-93c9-4785-98a9-44529c25b936 genome assembly, chromosome: 1 | blastn | 40597 | 189 | 1 | Bacteria | Bacillati | Chloroflexota | Candidatus Thermofontia | Phototrophicales | Phototrophicaceae | Phototrophicaceae bacterium | |||
| 4597607 | 4597607 | PRJNA788929_P_NODE_30184_length_287_cov_7.663551_g29523_i0 | PRJNA788929 | 30184 | 287 | 7.663551 | 21.99439137 | uncultured Chloroflexia bacterium | 1672391 | Bacteria | Bacteria | 307 | 5.13e-79 | NTclustered | gi|2874253698|emb|OY969424.1| | 1672391 | g29523 | i0 | 88.889 | 151.721254355401 | 252 | 25 | 87 | 3 | 28 | 278 | 971186 | 971435 | MAG: uncultured Chloroflexia bacterium isolate MFD06229.bin.c.1 genome assembly, chromosome: 1 | blastn | 43544 | 307 | 1 | Bacteria | Bacillati | Chloroflexota | Chloroflexia | uncultured Chloroflexia bacterium | |||||
| 7147586 | 7147586 | PRJNA788929_P_NODE_12486_length_489_cov_120.685096_g11829_i0 | PRJNA788929 | 12486 | 489 | 120.685096 | 590.15011944 | Phototrophicus methaneseepsis | 2710758 | Bacteria | Bacteria | 383 | 1.4899999999999994e-101 | NTclustered | gi|1932369605|gb|CP062983.1| | 2710758 | g11829 | i0 | 81.612 | 175.934560327198 | 484 | 70 | 96 | 12 | 1 | 470 | 2827346 | 2826868 | Phototrophicus methaneseepsis strain ZRK33 chromosome, complete genome | blastn | 86032 | 383 | 1 | Bacteria | Bacillati | Chloroflexota | Candidatus Thermofontia | Phototrophicales | Phototrophicaceae | Phototrophicus | Phototrophicus methaneseepsis | ||
| 11418122 | 11418122 | PRJNA788929_P_NODE_19929_length_366_cov_19.027304_g19269_i0 | PRJNA788929 | 19929 | 366 | 19.027304 | 69.63993264 | Chloroflexus | 1107 | Bacteria | Bacteria | 270 | 8.81e-68 | NTclustered | gi|470483916|ref|NR_076619.1| | 152260 | g19269 | i0 | 81.902 | 3.55464480874317 | 326 | 54 | 88 | 4 | 45 | 366 | 1337 | 1661 | Chloroflexus aggregans strain MD-66 23S ribosomal RNA gene, complete sequence | blastn | 1301 | 270 | 1 | Bacteria | Bacillati | Chloroflexota | Chloroflexia | Chloroflexales | Chloroflexaceae | Chloroflexus | Chloroflexus aggregans | ||
| 13523400 | 13523400 | PRJNA788929_P_NODE_49711_length_200_cov_6.425197_g49050_i0 | PRJNA788929 | 49711 | 200 | 6.425197 | 12.850394 | uncultured Chloroflexia bacterium | 1672391 | Bacteria | Bacteria | 113 | 7.860000000000001e-21 | NTclustered | gi|2874253981|emb|OY970306.1| | 1672391 | g49050 | i0 | 80.986 | 1.52 | 142 | 27 | 71 | 0 | 19 | 160 | 1451891 | 1452032 | MAG: uncultured Chloroflexia bacterium isolate MFD02134.bin.c.1 genome assembly, chromosome: 1 | blastn | 304 | 113 | 1 | Bacteria | Bacillati | Chloroflexota | Chloroflexia | uncultured Chloroflexia bacterium | |||||
| 17347309 | 17347309 | PRJNA788929_P_NODE_11014_length_531_cov_43.683406_g10361_i0 | PRJNA788929 | 11014 | 531 | 43.683406 | 231.95888586 | Phototrophicus methaneseepsis | 2710758 | Bacteria | Bacteria | 736 | 0 | NTclustered | gi|1932369605|gb|CP062983.1| | 2710758 | g10361 | i0 | 94.715 | 114.69868173258 | 473 | 25 | 89 | 0 | 36 | 508 | 4993626 | 4994098 | Phototrophicus methaneseepsis strain ZRK33 chromosome, complete genome | blastn | 60905 | 736 | 1 | Bacteria | Bacillati | Chloroflexota | Candidatus Thermofontia | Phototrophicales | Phototrophicaceae | Phototrophicus | Phototrophicus methaneseepsis | ||
| 17347857 | 17347857 | PRJNA788929_P_NODE_43894_length_234_cov_22.310559_g43233_i0 | PRJNA788929 | 43894 | 234 | 22.310559 | 52.20670806 | Aggregatilineales bacterium | 2952883 | Bacteria | Bacteria | 124 | 4.38e-24 | NTclustered | gi|2621701642|emb|OY760398.1| | 2952883 | g43233 | i0 | 80.114 | 4.76495726495726 | 176 | 27 | 73 | 8 | 64 | 234 | 380999 | 381171 | MAG: Aggregatilineales bacterium isolate 948f1344-b363-40c2-9c6d-9b25e8b84bf3 genome assembly, chromosome: 1 | blastn | 1115 | 124 | 1 | Bacteria | Bacillati | Chloroflexota | Anaerolineae | Aggregatilineales | Aggregatilineales bacterium | ||||
| 24995892 | 24995892 | PRJNA788929_P_NODE_31340_length_280_cov_33.429952_g30679_i0 | PRJNA788929 | 31340 | 280 | 33.429952 | 93.6038656 | uncultured Chloroflexia bacterium | 1672391 | Bacteria | Bacteria | 169 | 2.46e-37 | NTclustered | gi|2874254132|emb|OY970217.1| | 1672391 | g30679 | i0 | 80.617 | 211.132142857143 | 227 | 37 | 80 | 5 | 33 | 257 | 3521942 | 3521721 | MAG: uncultured Chloroflexia bacterium isolate MFD05684.bin.1.130 genome assembly, chromosome: 1 | blastn | 59117 | 169 | 1 | Bacteria | Bacillati | Chloroflexota | Chloroflexia | uncultured Chloroflexia bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;