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contig_metadata

26 rows where analysis = "blastn", bioproject = "PRJNA788929" and tax_clade = "Amoebozoa"

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tax_phylum 3

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 26 ✖

bioproject 1

  • PRJNA788929 · 26 ✖

analysis 1

  • blastn · 26 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
769171 769171 PRJNA788929_P_NODE_19941_length_366_cov_14.406143_g19281_i0 PRJNA788929 19941 366 14.406143 52.72648338 uncultured Vannellidae 544561 Discosea other_Eukaryota 427 4.94e-115   NTclustered gi|724028231|gb|KP099890.1| 544561 g19281 i0 89.143 84.9781420765027 350 28 94 9 1 343 860 514 Uncultured Vannellidae clone b17 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 31102 427 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae   uncultured Vannellidae
1214321 1214321 PRJNA788929_P_NODE_43901_length_234_cov_17.726708_g43240_i0 PRJNA788929 43901 234 17.726708 41.48049672 root 1 Root_unresolved Root_unresolved 390 3.909999999999999e-104   NTclustered gi|909719646|gb|KT185626.1| 5755 g43240 i0 100 54.7777777777778 211 0 90 0 24 234 3755 3965 Acanthamoeba castellanii 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 12818 390 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
2045654 2045654 PRJNA788929_P_NODE_7202_length_701_cov_596.738854_g6568_i0 PRJNA788929 7202 701 596.738854 4183.13936654 Cochliopodium minus 313997 Discosea other_Eukaryota 1016 0   NTclustered gi|330902862|gb|JF298257.1| 313997 g6568 i0 95.49 46.0356633380884 643 18 91 10 1 640 638 4 Cochliopodium minus 18S ribosomal RNA gene, partial sequence blastn 32271 1016 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium minus
2489581 2489581 PRJNA788929_P_NODE_12602_length_487_cov_13.500000_g11945_i0 PRJNA788929 12602 487 13.5 65.745 Vannella 95228 Discosea other_Eukaryota 846 0   NTclustered gi|319659363|gb|GU320600.1| 943213 g11945 i0 99.151 94.7207392197125 471 3 97 1 1 470 472 2 Vannella sp. COHH 72 18S ribosomal RNA gene, partial sequence blastn 46129 846 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella sp. COHH 72
4597395 4597395 PRJNA788929_P_NODE_16804_length_406_cov_123.828829_g16145_i0 PRJNA788929 16804 406 123.828829 502.74504574 Vannella septentrionalis 197531 Discosea other_Eukaryota 669 0   NTclustered gi|300078499|gb|GU001161.1| 197531 g16145 i0 98.172 45.7955665024631 383 7 94 0 1 383 3157 2775 Vannella septentrionalis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 18593 669 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella septentrionalis
4597543 4597543 PRJNA788929_P_NODE_25564_length_316_cov_12.259259_g24903_i0 PRJNA788929 25564 316 12.259259 38.73925844 Physarum polycephalum 5791 Evosea other_Eukaryota 390 5.5199999999999996e-104   NTclustered gi|161209|gb|M21501.1|SLMACT5 5791 g24903 i0 93.536 76.4113924050633 263 16 83 1 54 316 24 285 P.polycephalum actin (Ppa5) mRNA, complete cds blastn 24146 390 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum polycephalum
4597830 4597830 PRJNA788929_P_NODE_44364_length_232_cov_7.031447_g43703_i0 PRJNA788929 44364 232 7.031447 16.31295704 Phalansterium filosum 857046 Evosea other_Eukaryota 108 4.37e-19   NTclustered gi|300078501|gb|GU001163.1| 857046 g43703 i0 93.151 28.0301724137931 73 5 31 0 1 73 3100 3028 Phalansterium sp. EEG-2010/THA 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 6503 108 1 Eukaryota Amoebozoa   Evosea Variosea     Phalansterium Phalansterium filosum
7147551 7147551 PRJNA788929_P_NODE_10626_length_544_cov_23.352442_g9973_i0 PRJNA788929 10626 544 23.352442 127.03728448 Cochliopodium minus 313997 Discosea other_Eukaryota 654 0   NTclustered gi|330902862|gb|JF298257.1| 313997 g9973 i0 91.322 50.9963235294118 484 34 89 7 1 483 480 4 Cochliopodium minus 18S ribosomal RNA gene, partial sequence blastn 27742 654 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium minus
7147653 7147653 PRJNA788929_P_NODE_16986_length_403_cov_81.739394_g16327_i0 PRJNA788929 16986 403 81.739394 329.40975782 Polyschismium peyerimhoffii 2911783 Evosea other_Eukaryota 285 3.5e-72   NTclustered gi|2161226355|gb|MZ313553.1| 2911783 g16327 i0 82.682 29.5037220843672 358 27 83 26 56 390 6687 7032 Polyschismium peyerimhoffii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 11890 285 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Didymiaceae Polyschismium Polyschismium peyerimhoffii
7147888 7147888 PRJNA788929_P_NODE_32826_length_273_cov_8.020000_g32165_i0 PRJNA788929 32826 273 8.02 21.8946 Tubulinea group 04 sp. PPD16 1215999 Tubulinea other_Eukaryota 455 1.6300000000000002e-123   NTclustered gi|399764279|gb|JQ271790.1| 1215999 g32165 i0 99.206 13.0842490842491 252 2 92 0 1 252 514 263 Tubulinea group 04 sp. PPD16 18S ribosomal RNA gene, partial sequence blastn 3572 455 1 Eukaryota Amoebozoa   Tubulinea         Tubulinea group 04 sp. PPD16
7148259 7148259 PRJNA788929_P_NODE_9306_length_594_cov_55.479846_g8655_i0 PRJNA788929 9306 594 55.479846 329.55028524 Didymium spongiosum 289992 Evosea other_Eukaryota 422 3.89e-113   NTclustered gi|2161226356|gb|MZ313554.1| 289992 g8655 i0 90.184 23.1043771043771 326 28 73 3 247 570 7850 7527 Mucilago crustacea 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 13724 422 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Didymiaceae Didymium Didymium spongiosum
8867248 8867248 PRJNA788929_P_NODE_14447_length_446_cov_1.697051_g13788_i0 PRJNA788929 14447 446 1.697051 7.56884746 Ripella 1217112 Discosea other_Eukaryota 780 0   NTclustered gi|1269228349|gb|MF683474.1| 2047821 g13788 i0 98.214 100.495515695067 448 4 100 4 1 446 1152 707 Ripella platypodia clone 23.4.22 18S ribosomal RNA gene, partial sequence blastn 44821 785 0.993630573248408 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella platypodia
10973475 10973475 PRJNA788929_P_NODE_37349_length_252_cov_32.122905_g36688_i0 PRJNA788929 37349 252 32.122905 80.9497206 Paraflabellula hoguae 136459 Tubulinea other_Eukaryota 281 2.68e-71   NTclustered gi|145386791|gb|EF216916.1| 136459 g36688 i0 89.908 20.6388888888889 218 22 87 0 34 251 144 361 Paraflabellula hoguae 28S large subunit ribosomal RNA gene, partial sequence blastn 5201 281 1 Eukaryota Amoebozoa   Tubulinea Elardia Leptomyxida Flabellulidae Paraflabellula Paraflabellula hoguae
11418134 11418134 PRJNA788929_P_NODE_20949_length_356_cov_18.293286_g20289_i0 PRJNA788929 20949 356 18.293286 65.12409816 Didymium 5792 Evosea other_Eukaryota 616 9.53e-172   NTclustered gi|25989341|gb|AY062881.1| 181200 g20289 i0 100 86.2303370786517 333 0 94 0 24 356 841 1173 Hyperamoeba dachnaya small subunit ribosomal RNA gene, partial sequence blastn 30698 616 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Didymiaceae Didymium Didymium dachnayum
11418382 11418382 PRJNA788929_P_NODE_8669_length_621_cov_61.346715_g8019_i0 PRJNA788929 8669 621 61.346715 380.96310015 Physariida 5789 Evosea other_Eukaryota 564 6.4e-156   NTclustered gi|3221|emb|V01159.1| 5791 g8019 i0 84.193 27.4347826086957 601 74 95 19 11 598 3201 2609 Physarum polycephalum gene encoding 5.8S rRNA and 26S rRNA blastn 17037 569 0.991212653778559 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum polycephalum
12248932 12248932 PRJNA788929_P_NODE_3250_length_1153_cov_68.561111_g2843_i0 PRJNA788929 3250 1153 68.561111 790.50960983 Cochliopodium kieliense 1512276 Discosea other_Eukaryota 1629 0   NTclustered gi|659103926|gb|KJ569726.1| 1512276 g2843 i0 93.525 62.5724197745013 1112 44 95 21 59 1153 4 1104 Cochliopodium kieliense clone 9605 18S ribosomal RNA gene, partial sequence blastn 72146 1629 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium kieliense
13523001 13523001 PRJNA788929_P_NODE_23071_length_336_cov_21.874525_g22410_i0 PRJNA788929 23071 336 21.874525 73.498404 Ripella sp. GP2 1217115 Discosea other_Eukaryota 516 9.35e-142   NTclustered gi|399764204|gb|JQ271715.1| 1217115 g22410 i0 96.795 93.2410714285714 312 4 92 4 1 309 550 242 Ripella sp. GP2 18S ribosomal RNA gene, partial sequence blastn 31329 516 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. GP2
13523332 13523332 PRJNA788929_P_NODE_44151_length_233_cov_9.612500_g43490_i0 PRJNA788929 44151 233 9.6125 22.397125 Spumochlamys bryora 675832 Tubulinea other_Eukaryota 346 8.54e-91   NTclustered gi|259595677|gb|FJ705341.1| 675832 g43490 i0 96.667 1.80257510729614 210 3 90 1 24 233 1626 1831 Spumochlamys bryora clone 1901 18S ribosomal RNA gene, partial sequence blastn 420 346 1 Eukaryota Amoebozoa   Tubulinea Corycida   Microchlamyiidae Spumochlamys Spumochlamys bryora
17347490 17347490 PRJNA788929_P_NODE_2134_length_1439_cov_182.849195_g1742_i1 PRJNA788929 2134 1439 182.849195 2631.19991605 Cochliopodium actinophorum 703021 Discosea other_Eukaryota 1483 0   NTclustered gi|330902848|gb|JF298251.1| 703021 g1742 i1 85.571 53.7261987491313 1497 125 100 66 1 1439 614 2077 Cochliopodium actinophorum clone 1203 18S ribosomal RNA gene, partial sequence blastn 77312 1483 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium actinophorum
18620568 18620568 PRJNA788929_P_NODE_12155_length_498_cov_33.044706_g11498_i0 PRJNA788929 12155 498 33.044706 164.56263588 Didymium iridis 5793 Evosea other_Eukaryota 106 3.68e-18   NTclustered gi|2687|emb|X60210.1| 5793 g11498 i0 77.033 7.50401606425703 209 33 42 9 1 207 5054 5249 D.iridis LSU rRNA gene blastn 3737 106 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Didymiaceae Didymium Didymium iridis
18620746 18620746 PRJNA788929_P_NODE_22795_length_339_cov_7.078947_g22134_i0 PRJNA788929 22795 339 7.078947 23.99763033 Phalansterium filosum 857046 Evosea other_Eukaryota 135 3.0900000000000003e-27   NTclustered gi|300078501|gb|GU001163.1| 857046 g22134 i0 89.72 29.8407079646018 107 10 51 1 228 334 3046 3151 Phalansterium sp. EEG-2010/THA 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 10116 135 1 Eukaryota Amoebozoa   Evosea Variosea     Phalansterium Phalansterium filosum
19066093 19066093 PRJNA788929_P_NODE_50035_length_198_cov_5.648000_g49374_i0 PRJNA788929 50035 198 5.648 11.18304 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 246 7.34e-61   NTclustered gi|399764264|gb|JQ271775.1| 1215986 g49374 i0 91.667 43.7222222222222 180 11 89 4 1 177 1510 1332 Tubulinea group 02 sp. 1HFKJ 18S ribosomal RNA gene, partial sequence blastn 8657 246 1 Eukaryota Amoebozoa   Tubulinea         Tubulinea group 02 sp. 1HFKJ
19896241 19896241 PRJNA788929_P_NODE_33736_length_269_cov_2.193878_g33075_i0 PRJNA788929 33736 269 2.193878 5.90153182 Planopodium desertum 2773111 Discosea other_Eukaryota 446 9.669999999999997e-121   NTclustered gi|330902849|gb|JF298243.1| 2773111 g33075 i0 99.19 46.6765799256506 247 2 92 0 23 269 733 979 Ovalopodium desertum clone 3701 18S ribosomal RNA gene, partial sequence blastn 12556 446 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Planopodium Planopodium desertum
22446511 22446511 PRJNA788929_P_NODE_1998_length_1487_cov_172.397454_g1742_i0 PRJNA788929 1998 1487 172.397454 2563.55014098 Cochliopodium minus 313997 Discosea other_Eukaryota 2054 0   NTclustered gi|330902862|gb|JF298257.1| 313997 g1742 i0 91.732 50.9583053127102 1524 51 100 51 1 1487 655 2140 Cochliopodium minus 18S ribosomal RNA gene, partial sequence blastn 75775 2054 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium minus
23722246 23722246 PRJNA788929_P_NODE_34859_length_263_cov_16.726316_g34198_i0 PRJNA788929 34859 263 16.726316 43.99021108 uncultured Rhizamoeba 1260765 Tubulinea other_Eukaryota 243 1.33e-59   NTclustered gi|511487963|gb|JX898537.1| 1260765 g34198 i0 85.185 13.0760456273764 243 29 91 7 24 263 15 253 Uncultured Rhizamoeba clone HCA_D03-34 28S ribosomal RNA gene, partial sequence blastn 3439 243 1 Eukaryota Amoebozoa   Tubulinea Elardia Leptomyxida Flabellulidae   uncultured Rhizamoeba
25441068 25441068 PRJNA788929_P_NODE_40480_length_245_cov_4.796512_g39819_i0 PRJNA788929 40480 245 4.796512 11.7514544 Cochliopodium 313557 Discosea other_Eukaryota 313 9.19e-81   NTclustered gi|59876024|gb|AY785057.1| 313998 g39819 i0 89.879 16.6489795918367 247 19 99 4 1 244 21 264 Cochliopodium sp. strain Kiel 18S ribosomal RNA gene, partial sequence blastn 4079 313 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium sp. strain Kiel

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;