RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA785164" and tax_phylum = "Acidobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Acidobacteriota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA785164 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3317391 3317391 PRJNA785164_P_NODE_36243_length_300_cov_2.035242_g35778_i0 PRJNA785164 36243 300 2.035242 6.105726 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 324 5.36e-84   NTclustered gi|2874253678|emb|OY969112.1| 171953 g35778 i0 89.189 58.7033333333333 259 28 86 0 9 267 3958646 3958904 MAG: uncultured Acidobacteriota bacterium isolate MFD04212.bin.1.16 genome assembly, chromosome: 1 blastn 17611 324 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
10970238 10970238 PRJNA785164_P_NODE_36569_length_299_cov_1.150442_g36104_i0 PRJNA785164 36569 299 1.150442 3.43982158 uncultured Acidobacteriaceae bacterium 194844 Bacteria Bacteria 122 2.0899999999999994e-23   NTclustered gi|310755448|gb|HQ213338.1| 194844 g36104 i0 93.827 8.1505016722408 81 5 27 0 216 296 1084 1164 Uncultured Acidobacteriaceae bacterium clone 3_L20 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence blastn 2437 122 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae   uncultured Acidobacteriaceae bacterium
21168572 21168572 PRJNA785164_P_NODE_33957_length_312_cov_0.924686_g33492_i0 PRJNA785164 33957 312 0.924686 2.88502032 Terriglobia bacterium 2081523 Bacteria Bacteria 287 7.35e-73   NTclustered gi|2814788349|emb|OY760650.2| 2081523 g33492 i0 83.495 1.95512820512821 309 49 99 2 2 309 3720823 3721130 MAG: Terriglobia bacterium isolate 5d79d33f-5ea2-468b-941e-0445094ce055 genome assembly, chromosome: 1 blastn 610 287 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia       Terriglobia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;