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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA785164" and tax_kingdom = "Orthornavirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Orthornavirae · 7 ✖

bioproject 1

  • PRJNA785164 · 7 ✖

analysis 1

  • blastn · 7 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8866569 8866569 PRJNA785164_P_NODE_16407_length_488_cov_3.175904_g15942_i0 PRJNA785164 16407 488 3.175904 15.49841152 root 1 Root_unresolved Root_unresolved 902 0   NTclustered gi|2057561291|gb|MZ399798.1| 11036 g15942 i0 100 99.9918032786885 488 0 100 0 1 488 623 136 Venezuelan equine encephalitis virus strain TC-83, complete genome blastn 48796 902 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Togaviridae Alphavirus Alphavirus venezuelan
8866676 8866676 PRJNA785164_P_NODE_47607_length_260_cov_3.294118_g47142_i0 PRJNA785164 47607 260 3.294118 8.5647068 root 1 Root_unresolved Root_unresolved 481 2.55e-131   NTclustered gi|992068117|gb|KC344485.2| 11036 g47142 i0 100 99.9538461538462 260 0 100 0 1 260 4474 4733 Venezuelan equine encephalitis virus strain VEEV/Equus ferus caballus/COL/CoAn5384/1967/IAB, complete genome blastn 25988 481 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Togaviridae Alphavirus Alphavirus venezuelan
15241957 15241957 PRJNA785164_P_NODE_44652_length_269_cov_2.219388_g44187_i0 PRJNA785164 44652 269 2.219388 5.97015372 root 1 Root_unresolved Root_unresolved 492 1.23e-134   NTclustered gi|992068117|gb|KC344485.2| 11036 g44187 i0 99.628 99.9925650557621 269 1 100 0 1 269 1595 1327 Venezuelan equine encephalitis virus strain VEEV/Equus ferus caballus/COL/CoAn5384/1967/IAB, complete genome blastn 26898 492 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Togaviridae Alphavirus Alphavirus venezuelan
19065148 19065148 PRJNA785164_P_NODE_1035_length_2361_cov_8.333916_g952_i0 PRJNA785164 1035 2361 8.333916 196.76375676 root 1 Root_unresolved Root_unresolved 4331 0   NTclustered gi|2057561291|gb|MZ399798.1| 11036 g952 i0 100 99.4455739093604 2345 0 99 0 4 2348 1614 3958 Venezuelan equine encephalitis virus strain TC-83, complete genome blastn 234791 4337 0.998616555222504 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Togaviridae Alphavirus Alphavirus venezuelan
19065149 19065149 PRJNA785164_P_NODE_10415_length_671_cov_3.772575_g9967_i0 PRJNA785164 10415 671 3.772575 25.31397825 root 1 Root_unresolved Root_unresolved 1240 0   NTclustered gi|692518277|gb|KJ410017.1| 11036 g9967 i0 100 99.8986587183309 671 0 100 0 1 671 545 1215 Venezuelan equine encephalitis virus isolate AB66640(VEEVIAB) nonstructural polyprotein precursor and structural polyprotein genes, complete cds blastn 67032 1240 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Togaviridae Alphavirus Alphavirus venezuelan
24165082 24165082 PRJNA785164_P_NODE_2019_length_1823_cov_3.128000_g1872_i0 PRJNA785164 2019 1823 3.128 57.02344 root 1 Root_unresolved Root_unresolved 3334 0   NTclustered gi|992068117|gb|KC344485.2| 11036 g1872 i0 100 98.8902907295666 1805 0 99 0 19 1823 5073 6877 Venezuelan equine encephalitis virus strain VEEV/Equus ferus caballus/COL/CoAn5384/1967/IAB, complete genome blastn 180277 3334 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Togaviridae Alphavirus Alphavirus venezuelan
24165094 24165094 PRJNA785164_P_NODE_25079_length_371_cov_1.902685_g24614_i0 PRJNA785164 25079 371 1.902685 7.05896135 root 1 Root_unresolved Root_unresolved 680 0   NTclustered gi|692518277|gb|KJ410017.1| 11036 g24614 i0 99.73 99.622641509434 371 1 100 0 1 371 4043 4413 Venezuelan equine encephalitis virus isolate AB66640(VEEVIAB) nonstructural polyprotein precursor and structural polyprotein genes, complete cds blastn 36960 680 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Togaviridae Alphavirus Alphavirus venezuelan

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;