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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA785164" and tax_clade = "CRESS viruses"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • CRESS viruses · 3 ✖

bioproject 1

  • PRJNA785164 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10142069 10142069 PRJNA785164_P_NODE_20508_length_421_cov_1.568966_g20043_i0 PRJNA785164 20508 421 1.568966 6.60534686 Viruses 10239 Viruses Viruses 726 0   NTclustered gi|1848664582|gb|MN891788.1| 2740165 g20043 i0 99.015 3.40855106888361 406 2 96 2 1 404 2166 1761 Brassica caulorapa CRESS virus strain pt079-cirl-1, complete genome blastn 1435 732 0.991803278688525 Viruses CRESS viruses Shotokuvirae Cressdnaviricota         Brassica caulorapa CRESS virus
11417463 11417463 PRJNA785164_P_NODE_50109_length_253_cov_2.055556_g49644_i0 PRJNA785164 50109 253 2.055556 5.20055668 Viruses 10239 Viruses Viruses 436 5.419999999999999e-118   NTclustered gi|1848664582|gb|MN891788.1| 2740165 g49644 i0 100 2.79841897233202 236 0 93 0 1 236 305 70 Brassica caulorapa CRESS virus strain pt079-cirl-1, complete genome blastn 708 436 1 Viruses CRESS viruses Shotokuvirae Cressdnaviricota         Brassica caulorapa CRESS virus
15241911 15241911 PRJNA785164_P_NODE_30092_length_333_cov_4.634615_g29627_i0 PRJNA785164 30092 333 4.634615 15.43326795 Viruses 10239 Viruses Viruses 616 8.87e-172   NTclustered gi|1848664582|gb|MN891788.1| 2740165 g29627 i0 100 3 333 0 100 0 1 333 2503 2171 Brassica caulorapa CRESS virus strain pt079-cirl-1, complete genome blastn 999 616 1 Viruses CRESS viruses Shotokuvirae Cressdnaviricota         Brassica caulorapa CRESS virus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;