RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA785164" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA785164 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10970058 10970058 PRJNA785164_P_NODE_28589_length_343_cov_1.629630_g28124_i0 PRJNA785164 28589 343 1.62963 5.5896309 uncultured Candidatus Saccharibacteria bacterium 179883 Bacteria Bacteria 69.4 3.22e-7   NTclustered gi|2874254068|emb|OY970151.1| 179883 g28124 i0 92 0.370262390670554 50 2 14 2 288 336 683011 683059 MAG: uncultured Candidatus Saccharibacteria bacterium isolate MFD00082.bin.2.65 genome assembly, chromosome: 1 blastn 127 69.4 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         uncultured Candidatus Saccharibacteria bacterium
24165125 24165125 PRJNA785164_P_NODE_36059_length_301_cov_1.960526_g35594_i0 PRJNA785164 36059 301 1.960526 5.90118326 Candidatus Nanosynbacteraceae 2093822 Bacteria Bacteria 490 5.01e-134   NTclustered gi|2306607015|emb|OX335598.1| 2026720 g35594 i0 96.013 11.5681063122924 301 12 100 0 1 301 431952 431652 Candidatus Saccharibacteria bacterium isolate PRJEB56001 genome assembly, chromosome: contig00001 blastn 3482 492 0.995934959349594 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;