RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA784979" and tax_clade = "Cyanobacteriota/Melainabacteria group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Cyanobacteriota/Melainabacteria group · 2 ✖

bioproject 1

  • PRJNA784979 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3316833 3316833 PRJNA784979_S_NODE_5983_length_202_cov_0.666667_g5941_i0 PRJNA784979 5983 202 0.666667 1.34666734 Leptolyngbya sp. 7M 2812896 Bacteria Bacteria 279 7.41e-71   NTclustered gi|2028908486|gb|CP070897.1| 2812896 g5941 i0 93.717 88.7673267326733 191 5 91 3 10 193 2152089 2152279 Leptolyngbya sp. 7M chromosome blastn 17931 279 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Leptolyngbyales Leptolyngbyaceae Leptolyngbya Leptolyngbya sp. 7M
20339807 20339807 PRJNA784979_S_NODE_8096_length_181_cov_1.553030_g8054_i0 PRJNA784979 8096 181 1.55303 2.8109843 root 1 Root_unresolved Root_unresolved 333 4.9000000000000015e-87   NTclustered gi|63022551|gb|DQ004310.1| 1211 g8054 i0 100 181.005524861878 180 0 99 0 2 181 228 49 Uncultured cyanobacterium clone PEN12 16S ribosomal RNA gene, partial sequence blastn 32762 335 0.994029850746269 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota         uncultured cyanobacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;