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contig_metadata

17 rows where analysis = "blastn", bioproject = "PRJNA784979" and tax_clade = "Amoebozoa"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 17 ✖

bioproject 1

  • PRJNA784979 · 17 ✖

analysis 1

  • blastn · 17 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2488895 2488895 PRJNA784979_S_NODE_5222_length_211_cov_4.351852_g5180_i0 PRJNA784979 5222 211 4.351852 9.18240772 Vannella 95228 Discosea other_Eukaryota 307 3.5800000000000004e-79   NTclustered gi|399764226|gb|JQ271737.1| 1215641 g5180 i0 95.408 91.6208530805687 196 3 91 5 6 196 1314 1120 Vannella sp. ELH6 18S ribosomal RNA gene, partial sequence blastn 19332 309 0.993527508090615 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella sp. ELH6
2488924 2488924 PRJNA784979_S_NODE_8962_length_174_cov_2.256000_g8920_i0 PRJNA784979 8962 174 2.256 3.92544 Protostelium 472930 Evosea other_Eukaryota 313 6.079999999999998e-81   NTclustered gi|262262921|gb|FJ766464.1| 472931 g8920 i0 99.422 361.64367816092 173 0 99 1 1 173 1331 1502 Protostelium mycophagum strain KA-T15-2 small subunit ribosomal RNA gene, partial sequence blastn 62926 313 1 Eukaryota Amoebozoa   Evosea Variosea Protosteliida Protosteliaceae Protostelium Protostelium mycophagum
8418671 8418671 PRJNA784979_S_NODE_3747_length_240_cov_3.219895_g3705_i0 PRJNA784979 3747 240 3.219895 7.727748 Vannella septentrionalis 197531 Discosea other_Eukaryota 134 7.49e-27   NTclustered gi|300078499|gb|GU001161.1| 197531 g3705 i0 84.211 7.58333333333333 133 18 55 3 44 174 4224 4355 Vannella septentrionalis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 1820 134 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella septentrionalis
8418707 8418707 PRJNA784979_S_NODE_967_length_548_cov_7.092184_g925_i0 PRJNA784979 967 548 7.092184 38.86516832 Vannella septentrionalis 197531 Discosea other_Eukaryota 501 4.45e-137   NTclustered gi|300078499|gb|GU001161.1| 197531 g925 i0 83.544 66.1058394160584 553 73 99 17 1 542 862 1407 Vannella septentrionalis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 36226 501 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella septentrionalis
10969645 10969645 PRJNA784979_S_NODE_1229_length_458_cov_11.107579_g1187_i0 PRJNA784979 1229 458 11.107579 50.87271182 Vannella septentrionalis 197531 Discosea other_Eukaryota 595 1.6399999999999994e-165   NTclustered gi|300078499|gb|GU001161.1| 197531 g1187 i0 90.889 59.2205240174672 450 31 97 5 13 456 2867 2422 Vannella septentrionalis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 27123 595 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella septentrionalis
10969687 10969687 PRJNA784979_S_NODE_7669_length_184_cov_5.637037_g7627_i0 PRJNA784979 7669 184 5.637037 10.37214808 Vannella septentrionalis 197531 Discosea other_Eukaryota 250 5.18e-62   NTclustered gi|300078499|gb|GU001161.1| 197531 g7627 i0 92.655 46.9021739130435 177 8 94 5 12 184 3457 3632 Vannella septentrionalis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 8630 250 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella septentrionalis
12245125 12245125 PRJNA784979_S_NODE_2450_length_293_cov_4.868852_g2408_i0 PRJNA784979 2450 293 4.868852 14.26573636 Vannella septentrionalis 197531 Discosea other_Eukaryota 399 8.419999999999998e-107   NTclustered gi|300078499|gb|GU001161.1| 197531 g2408 i0 92.553 56.2491467576792 282 16 96 3 10 290 1627 1904 Vannella septentrionalis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 16481 399 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella septentrionalis
13519333 13519333 PRJNA784979_S_NODE_1791_length_353_cov_7.131579_g1749_i0 PRJNA784979 1791 353 7.131579 25.17447387 Vannella septentrionalis 197531 Discosea other_Eukaryota 381 3.749999999999999e-101   NTclustered gi|300078499|gb|GU001161.1| 197531 g1749 i0 88.199 45.1416430594901 322 34 91 3 8 327 3147 2828 Vannella septentrionalis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 15935 381 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella septentrionalis
16068057 16068057 PRJNA784979_S_NODE_2953_length_268_cov_4.319635_g2911_i0 PRJNA784979 2953 268 4.319635 11.5766218 Vannella sp. T02 1215673 Discosea other_Eukaryota 377 3.56e-100   NTclustered gi|399764258|gb|JQ271769.1| 1215673 g2911 i0 97.727 82.6679104477612 220 4 82 1 7 226 1813 1595 Vannella sp. T02 18S ribosomal RNA gene, partial sequence blastn 22155 377 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella sp. T02
17343804 17343804 PRJNA784979_S_NODE_7434_length_186_cov_13.423358_g7392_i0 PRJNA784979 7434 186 13.423358 24.96744588 Vannella septentrionalis 197531 Discosea other_Eukaryota 279 6.7000000000000014e-71   NTclustered gi|300078499|gb|GU001161.1| 197531 g7392 i0 94.972 96.6720430107527 179 7 95 2 3 179 2261 2439 Vannella septentrionalis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 17981 279 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella septentrionalis
18617087 18617087 PRJNA784979_S_NODE_13655_length_158_cov_10.614679_g13613_i0 PRJNA784979 13655 158 10.614679 16.77119282 Vannella septentrionalis 197531 Discosea other_Eukaryota 265 1.5399999999999998e-66   NTclustered gi|300078499|gb|GU001161.1| 197531 g13613 i0 100 91.6708860759494 143 0 91 0 7 149 3623 3765 Vannella septentrionalis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 14484 265 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella septentrionalis
19065139 19065139 PRJNA784979_S_NODE_9455_length_171_cov_2.122951_g9413_i0 PRJNA784979 9455 171 2.122951 3.63024621 Protostelium 472930 Evosea other_Eukaryota 296 5.99e-76   NTclustered gi|262262921|gb|FJ766464.1| 472931 g9413 i0 98.802 6.55555555555556 167 0 98 1 1 167 833 669 Protostelium mycophagum strain KA-T15-2 small subunit ribosomal RNA gene, partial sequence blastn 1121 296 1 Eukaryota Amoebozoa   Evosea Variosea Protosteliida Protosteliaceae Protostelium Protostelium mycophagum
21168048 21168048 PRJNA784979_S_NODE_1057_length_515_cov_5.693133_g1015_i0 PRJNA784979 1057 515 5.6931330000000004 29.31963495 Vannella sp. LITHOV 1215650 Discosea other_Eukaryota 808 0   NTclustered gi|399764235|gb|JQ271746.1| 1215650 g1015 i0 96.728 93.3087378640777 489 9 94 5 23 508 15 499 Vannella sp. LITHOV 18S ribosomal RNA gene, partial sequence blastn 48054 808 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella sp. LITHOV
21615576 21615576 PRJNA784979_S_NODE_13857_length_155_cov_3.056604_g13815_i0 PRJNA784979 13857 155 3.056604 4.7377362 Vannella 95228 Discosea other_Eukaryota 255 9.05e-64   NTclustered gi|300078499|gb|GU001161.1| 197531 g13815 i0 97.351 96.7290322580645 151 3 97 1 5 155 550 401 Vannella septentrionalis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 14993 255 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella septentrionalis
23718369 23718369 PRJNA784979_S_NODE_1439_length_402_cov_6.288952_g1397_i0 PRJNA784979 1439 402 6.288952 25.28158704 Vannella sp. ELH6 1215641 Discosea other_Eukaryota 492 1.92e-134   NTclustered gi|399764226|gb|JQ271737.1| 1215641 g1397 i0 91.16 71.9800995024876 362 32 90 0 35 396 739 1100 Vannella sp. ELH6 18S ribosomal RNA gene, partial sequence blastn 28936 492 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella sp. ELH6
23718384 23718384 PRJNA784979_S_NODE_4259_length_228_cov_1.843575_g4217_i0 PRJNA784979 4259 228 1.843575 4.203351 Vannella septentrionalis 197531 Discosea other_Eukaryota 316 6.53e-82   NTclustered gi|300078499|gb|GU001161.1| 197531 g4217 i0 97.826 77.7456140350877 184 3 80 1 7 189 2105 1922 Vannella septentrionalis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 17726 316 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella septentrionalis
24164954 24164954 PRJNA784979_S_NODE_10079_length_167_cov_2.906780_g10037_i0 PRJNA784979 10079 167 2.90678 4.8543226 Vannella 95228 Discosea other_Eukaryota 252 1.29e-62   NTclustered gi|2326458234|gb|OP791903.1| 207334 g10037 i0 95.062 96.2874251497006 162 5 95 3 9 167 1510 1349 Vannella ebro clone A616.1 small subunit ribosomal RNA gene, partial sequence blastn 16080 252 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella ebro

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;