RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA784298" and tax_phylum = "Lenarviricota"

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tax_superkingdom 1

tax_phylum 1

  • Lenarviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA784298 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7143841 7143841 PRJNA784298_P_NODE_24686_length_248_cov_0.880000_g24485_i0 PRJNA784298 24686 248 0.88 2.1824 Botourmiaviridae sp. 2808997 Viruses Viruses 128 3.62e-25   NTclustered gi|2320142628|gb|ON585088.1| 2808997 g24485 i0 87.5 0.451612903225806 112 12 45 2 49 159 1341 1451 MAG: Botourmiaviridae sp. isolate PMS2_Contig239 RNA-dependent RNA polymerase gene, complete cds blastn 112 128 1 Viruses   Orthornavirae Lenarviricota Miaviricetes Ourlivirales Botourmiaviridae   Botourmiaviridae sp.
12244918 12244918 PRJNA784298_P_NODE_19750_length_278_cov_1.473171_g19549_i0 PRJNA784298 19750 278 1.473171 4.09541538 Grapevine wood holobiome associated ourmia-like virus 24 3399168 Viruses Viruses 183 8.7e-42   NTclustered gi|2917510545|gb|PQ773470.1| 3399168 g19549 i0 81.59 1.16187050359712 239 28 82 14 49 276 311 78 Grapevine wood holobiome associated ourmia-like virus 24 RdRp gene, complete cds blastn 323 183 1 Viruses   Orthornavirae Lenarviricota Miaviricetes Ourlivirales Botourmiaviridae   Grapevine wood holobiome associated ourmia-like virus 24

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;