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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA784298" and tax_phylum = "Acidobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Acidobacteriota · 6 ✖

tax_kingdom 1

bioproject 1

  • PRJNA784298 · 6 ✖

analysis 1

  • blastn · 6 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2041368 2041368 PRJNA784298_P_NODE_6002_length_516_cov_158.866817_g5802_i0 PRJNA784298 6002 516 158.866817 819.75277572 uncultured Acidobacteriaceae bacterium 194844 Bacteria Bacteria 54.7 0.014   NTclustered gi|2874254114|emb|OY970199.1| 194844 g5802 i0 100 0.0562015503875969 29 0 6 0 451 479 42654 42682 MAG: uncultured Acidobacteriaceae bacterium isolate MFD04463.bin.1.15 genome assembly, chromosome: 1 blastn 29 54.7 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae   uncultured Acidobacteriaceae bacterium
8418470 8418470 PRJNA784298_P_NODE_22807_length_256_cov_2.278689_g22606_i0 PRJNA784298 22807 256 2.278689 5.83344384 Candidatus Acidiferrales bacterium 2952895 Bacteria Bacteria 446 9.139999999999999e-121   NTclustered gi|2874253721|emb|OY969563.1| 2952895 g22606 i0 98.047 98.03515625 256 5 100 0 1 256 636604 636859 MAG: Candidatus Acidoferrales bacterium isolate MFD05580.bin.1.43 genome assembly, chromosome: 1 blastn 25097 446 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Candidatus Acidiferrales     Candidatus Acidiferrales bacterium
12244841 12244841 PRJNA784298_P_NODE_12910_length_347_cov_2.386861_g12709_i0 PRJNA784298 12910 347 2.386861 8.28240767 Acidobacteriota bacterium 1978231 Bacteria Bacteria 228 5.089999999999998e-55   NTclustered gi|1958085512|gb|CP065000.1| 1978231 g12709 i0 81.979 3.59654178674352 283 38 81 11 68 347 3097160 3097432 Acidobacteria bacterium isolate Kalu_18-Q3-R12-55_MAXAC.078_cln chromosome, complete genome blastn 1248 228 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
13519035 13519035 PRJNA784298_P_NODE_12931_length_347_cov_1.649635_g12730_i0 PRJNA784298 12931 347 1.649635 5.72423345 Candidatus Acidiferrales bacterium 2952895 Bacteria Bacteria 619 7.179999999999999e-173   NTclustered gi|2874253786|emb|OY969770.1| 2952895 g12730 i0 98.847 119.706051873199 347 4 100 0 1 347 3515005 3514659 MAG: Candidatus Acidoferrales bacterium isolate MFD09222.bin.1.52 genome assembly, chromosome: 1 blastn 41538 619 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Candidatus Acidiferrales     Candidatus Acidiferrales bacterium
16067834 16067834 PRJNA784298_P_NODE_21353_length_266_cov_1.772021_g21152_i0 PRJNA784298 21353 266 1.772021 4.71357586 Bryobacterales bacterium F-183 2802972 Bacteria Bacteria 364 2.7499999999999986e-96   NTclustered gi|2131941663|dbj|AP025252.1| 2802972 g21152 i0 91.353 174.496240601504 266 23 100 0 1 266 636153 635888 Bryobacterales bacterium F-183 DNA, nearly complete genome blastn 46416 364 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales     Bryobacterales bacterium F-183
24991741 24991741 PRJNA784298_P_NODE_17000_length_300_cov_5.114537_g16799_i0 PRJNA784298 17000 300 5.114537 15.343611 Candidatus Acidiferrales bacterium 2952895 Bacteria Bacteria 444 3.94e-120   NTclustered gi|2874253721|emb|OY969563.1| 2952895 g16799 i0 93.333 3.89333333333333 300 20 100 0 1 300 4772946 4773245 MAG: Candidatus Acidoferrales bacterium isolate MFD05580.bin.1.43 genome assembly, chromosome: 1 blastn 1168 444 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Candidatus Acidiferrales     Candidatus Acidiferrales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;