RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA782551" and tax_kingdom = "Bamfordvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Bamfordvirae · 3 ✖

bioproject 1

  • PRJNA782551 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5040804 5040804 PRJNA782551_P_NODE_16544_length_250_cov_0.870056_g16422_i0 PRJNA782551 16544 250 0.870056 2.17514 root 1 Root_unresolved Root_unresolved 462 8.83e-126   NTclustered gi|2452970428|gb|OQ518271.1| 10515 g16422 i0 100 100 250 0 100 0 1 250 14900 14651 Human adenovirus 2 isolate HAdV-C2/USA/8A5/2011, complete genome blastn 25000 462 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
15241029 15241029 PRJNA782551_P_NODE_8652_length_319_cov_1.491870_g8530_i0 PRJNA782551 8652 319 1.49187 4.7590653 root 1 Root_unresolved Root_unresolved 590 5.1299999999999986e-164   NTclustered gi|2452970428|gb|OQ518271.1| 10515 g8530 i0 100 100 319 0 100 0 1 319 17014 17332 Human adenovirus 2 isolate HAdV-C2/USA/8A5/2011, complete genome blastn 31900 590 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
21614639 21614639 PRJNA782551_P_NODE_11497_length_283_cov_1.100000_g11375_i0 PRJNA782551 11497 283 1.1 3.113 root 1 Root_unresolved Root_unresolved 501 2.1599999999999998e-137   NTclustered gi|2452970428|gb|OQ518271.1| 10515 g11375 i0 98.587 100 283 4 100 0 1 283 16444 16162 Human adenovirus 2 isolate HAdV-C2/USA/8A5/2011, complete genome blastn 28300 501 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;