RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA782235" and tax_phylum = "Chlamydiota"

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tax_superkingdom 1

tax_phylum 1

  • Chlamydiota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA782235 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12691952 12691952 PRJNA782235_P_NODE_15710_length_254_cov_0.850829_g15521_i0 PRJNA782235 15710 254 0.850829 2.16110566 Chlamydiia 204429 Bacteria Bacteria 283 7.51e-72   NTclustered gi|470491594|ref|NR_077046.1| 83552 g15521 i0 87.059 168.188976377953 255 28 98 5 1 250 405 659 Parachlamydia acanthamoebae strain UV-7 23S ribosomal RNA gene, complete sequence blastn 42720 285 0.992982456140351 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Parachlamydiaceae Parachlamydia Parachlamydia acanthamoebae
25439100 25439100 PRJNA782235_P_NODE_13260_length_269_cov_1.153061_g13071_i0 PRJNA782235 13260 269 1.153061 3.10173409 Chlamydiia 204429 Bacteria Bacteria 244 3.79e-60   NTclustered gi|1000729566|gb|KT030899.1| 1345621 g13071 i0 86.147 58.7992565055762 231 26 84 6 2 228 1709 1937 Candidatus Similichlamydia labri strain SM160513-33 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence blastn 15817 244 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Candidatus Parilichlamydiaceae Candidatus Similichlamydia Candidatus Similichlamydia labri

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;