contig_metadata
24 rows where analysis = "blastn", bioproject = "PRJNA782235" and tax_kingdom = "Thermotogati"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 763473 | 763473 | PRJNA782235_P_NODE_5141_length_385_cov_2.804487_g4952_i0 | PRJNA782235 | 5141 | 385 | 2.804487 | 10.79727495 | Trueperaceae bacterium | 2026798 | Bacteria | Bacteria | 544 | 4.969999999999998e-150 | NTclustered | gi|2621701816|emb|OY759346.1| | 2026798 | g4952 | i0 | 93.443 | 541.916883116883 | 366 | 24 | 95 | 0 | 20 | 385 | 3600884 | 3600519 | MAG: Trueperaceae bacterium isolate dd143a13-9bf8-4812-ba0e-a3cf349d91ff genome assembly, chromosome: 1 | blastn | 208638 | 544 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Trueperales | Trueperaceae | Trueperaceae bacterium | |||
| 3314549 | 3314549 | PRJNA782235_P_NODE_16163_length_251_cov_1.297753_g15974_i0 | PRJNA782235 | 16163 | 251 | 1.297753 | 3.25736003 | Deinococcus ficus | 317577 | Bacteria | Bacteria | 372 | 1.54e-98 | NTclustered | gi|1220362168|gb|CP021081.1| | 317577 | g15974 | i0 | 93.307 | 187.051792828685 | 254 | 13 | 100 | 3 | 1 | 251 | 2342569 | 2342821 | Deinococcus ficus strain CC-FR2-10, complete genome | blastn | 46950 | 372 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus ficus | ||
| 3314647 | 3314647 | PRJNA782235_P_NODE_22603_length_246_cov_0.890173_g22414_i0 | PRJNA782235 | 22603 | 246 | 0.890173 | 2.18982558 | Deinococcus sp. NW-56 | 2080419 | Bacteria | Bacteria | 333 | 7.089999999999999e-87 | NTclustered | gi|1339790003|gb|CP026516.1| | 2080419 | g22414 | i0 | 91.057 | 250.906504065041 | 246 | 22 | 100 | 0 | 1 | 246 | 545693 | 545938 | Deinococcus sp. NW-56 chromosome, complete genome | blastn | 61723 | 333 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus sp. NW-56 | ||
| 3764078 | 3764078 | PRJNA782235_P_NODE_3263_length_501_cov_2.186916_g3076_i0 | PRJNA782235 | 3263 | 501 | 2.186916 | 10.95644916 | Deinococcus | 1298 | Bacteria | Bacteria | 881 | 0 | NTclustered | gi|1073549716|gb|KX946495.1| | 47478 | g3076 | i0 | 98.403 | 108.157684630739 | 501 | 8 | 100 | 0 | 1 | 501 | 876 | 376 | Deinococcus sp. strain FX4 16S ribosomal RNA gene, partial sequence | blastn | 54187 | 881 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus sp. | ||
| 5040673 | 5040673 | PRJNA782235_P_NODE_24764_length_244_cov_0.900585_g24575_i0 | PRJNA782235 | 24764 | 244 | 0.900585 | 2.1974274 | Deinococcus | 1298 | Bacteria | Bacteria | 440 | 4.019999999999999e-119 | NTclustered | gi|1435316362|gb|CP031158.1| | 980427 | g24575 | i0 | 99.18 | 2.42213114754098 | 244 | 2 | 100 | 0 | 1 | 244 | 265867 | 266110 | Deinococcus wulumuqiensis strain NEB 479 chromosome, complete genome | blastn | 591 | 440 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus wulumuqiensis | ||
| 5040714 | 5040714 | PRJNA782235_P_NODE_5144_length_385_cov_2.070513_g4955_i0 | PRJNA782235 | 5144 | 385 | 2.070513 | 7.97147505 | Deinococcus | 1298 | Bacteria | Bacteria | 701 | 0 | NTclustered | gi|105990360|gb|DQ514091.1| | 158789 | g4955 | i0 | 99.481 | 100.028571428571 | 385 | 2 | 100 | 0 | 1 | 385 | 405 | 21 | Uncultured Deinococcus sp. clone 100M2_A8 16S ribosomal RNA gene, partial sequence | blastn | 38511 | 706 | 0.992917847025496 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | uncultured Deinococcus sp. | ||
| 5866717 | 5866717 | PRJNA782235_P_NODE_13225_length_269_cov_1.311224_g13036_i0 | PRJNA782235 | 13225 | 269 | 1.311224 | 3.52719256 | Deinococcus gobiensis | 502394 | Bacteria | Bacteria | 252 | 2.26e-62 | NTclustered | gi|379998737|gb|CP002191.1| | 745776 | g13036 | i0 | 84.98 | 42.6505576208178 | 253 | 32 | 93 | 6 | 16 | 265 | 1189659 | 1189410 | Deinococcus gobiensis I-0, complete genome | blastn | 11473 | 252 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus gobiensis | ||
| 5866945 | 5866945 | PRJNA782235_P_NODE_3185_length_508_cov_3.177011_g2998_i0 | PRJNA782235 | 3185 | 508 | 3.177011 | 16.13921588 | Trueperaceae bacterium | 2026798 | Bacteria | Bacteria | 656 | 0 | NTclustered | gi|2621701816|emb|OY759346.1| | 2026798 | g2998 | i0 | 91.304 | 220.011811023622 | 483 | 39 | 95 | 3 | 1 | 482 | 3600962 | 3601442 | MAG: Trueperaceae bacterium isolate dd143a13-9bf8-4812-ba0e-a3cf349d91ff genome assembly, chromosome: 1 | blastn | 111766 | 656 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Trueperales | Trueperaceae | Trueperaceae bacterium | |||
| 7590346 | 7590346 | PRJNA782235_P_NODE_10146_length_288_cov_1.879070_g9957_i0 | PRJNA782235 | 10146 | 288 | 1.87907 | 5.4117216 | Deinococcus | 1298 | Bacteria | Bacteria | 366 | 8.38e-97 | NTclustered | gi|2264081587|gb|CP094462.1| | 1299 | g9957 | i0 | 89.583 | 26.4826388888889 | 288 | 30 | 100 | 0 | 1 | 288 | 1596249 | 1595962 | Deinococcus radiodurans strain BRD125 chromosome 1, complete sequence | blastn | 7627 | 366 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus radiodurans | ||
| 9691817 | 9691817 | PRJNA782235_P_NODE_24928_length_244_cov_0.900585_g24739_i0 | PRJNA782235 | 24928 | 244 | 0.900585 | 2.1974274 | Deinococcus sp. NW-56 | 2080419 | Bacteria | Bacteria | 370 | 5.35e-98 | NTclustered | gi|1339790003|gb|CP026516.1| | 2080419 | g24739 | i0 | 94.262 | 2.27049180327869 | 244 | 11 | 100 | 2 | 1 | 244 | 1988071 | 1988311 | Deinococcus sp. NW-56 chromosome, complete genome | blastn | 554 | 370 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus sp. NW-56 | ||
| 10967370 | 10967370 | PRJNA782235_P_NODE_15349_length_256_cov_1.431694_g15160_i0 | PRJNA782235 | 15349 | 256 | 1.431694 | 3.66513664 | Deinococcus radiopugnans | 57497 | Bacteria | Bacteria | 263 | 9.88e-66 | NTclustered | gi|730601855|gb|CP010028.1| | 57497 | g15160 | i0 | 85.156 | 8.0546875 | 256 | 38 | 100 | 0 | 1 | 256 | 1119871 | 1120126 | Deinococcus swuensis strain DY59, complete genome | blastn | 2062 | 263 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus radiopugnans | ||
| 10967600 | 10967600 | PRJNA782235_P_NODE_4549_length_411_cov_1.943787_g4360_i0 | PRJNA782235 | 4549 | 411 | 1.943787 | 7.98896457 | Deinococcus sp. NW-56 | 2080419 | Bacteria | Bacteria | 676 | 0 | NTclustered | gi|1339790003|gb|CP026516.1| | 2080419 | g4360 | i0 | 96.35 | 252.768856447689 | 411 | 15 | 100 | 0 | 1 | 411 | 2418008 | 2417598 | Deinococcus sp. NW-56 chromosome, complete genome | blastn | 103888 | 676 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus sp. NW-56 | ||
| 12242794 | 12242794 | PRJNA782235_P_NODE_10850_length_284_cov_1.199052_g10661_i0 | PRJNA782235 | 10850 | 284 | 1.199052 | 3.40530768 | Deinococcus sp. NW-56 | 2080419 | Bacteria | Bacteria | 220 | 6.79e-53 | NTclustered | gi|1339790003|gb|CP026516.1| | 2080419 | g10661 | i0 | 93.836 | 0.922535211267606 | 146 | 9 | 92 | 0 | 1 | 146 | 553257 | 553402 | Deinococcus sp. NW-56 chromosome, complete genome | blastn | 262 | 220 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus sp. NW-56 | ||
| 13517076 | 13517076 | PRJNA782235_P_NODE_15671_length_254_cov_1.353591_g15482_i0 | PRJNA782235 | 15671 | 254 | 1.353591 | 3.43812114 | Deinococcus sp. NW-56 | 2080419 | Bacteria | Bacteria | 370 | 5.61e-98 | NTclustered | gi|1339790003|gb|CP026516.1| | 2080419 | g15482 | i0 | 92.913 | 36.996062992126 | 254 | 18 | 100 | 0 | 1 | 254 | 429961 | 429708 | Deinococcus sp. NW-56 chromosome, complete genome | blastn | 9397 | 370 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus sp. NW-56 | ||
| 17341524 | 17341524 | PRJNA782235_P_NODE_18454_length_249_cov_0.875000_g18265_i0 | PRJNA782235 | 18454 | 249 | 0.875 | 2.17875 | Fretibacterium fastidiosum | 651822 | Bacteria | Bacteria | 372 | 1.52e-98 | NTclustered | gi|2869663113|emb|OZ209244.1| | 651822 | g18265 | i0 | 93.574 | 235.156626506024 | 249 | 16 | 100 | 0 | 1 | 249 | 69301 | 69053 | Fretibacterium fastidiosum strain SGP1 genome assembly, chromosome: Ff3 | blastn | 58554 | 372 | 1 | Bacteria | Thermotogati | Synergistota | Synergistia | Synergistales | Aminobacteriaceae | Fretibacterium | Fretibacterium fastidiosum | ||
| 17341562 | 17341562 | PRJNA782235_P_NODE_20934_length_247_cov_0.885057_g20745_i0 | PRJNA782235 | 20934 | 247 | 0.885057 | 2.18609079 | Deinococcus ficus | 317577 | Bacteria | Bacteria | 446 | 8.759999999999998e-121 | NTclustered | gi|1220362168|gb|CP021081.1| | 317577 | g20745 | i0 | 99.19 | 1 | 247 | 2 | 100 | 0 | 1 | 247 | 2027282 | 2027528 | Deinococcus ficus strain CC-FR2-10, complete genome | blastn | 247 | 446 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus ficus | ||
| 18614942 | 18614942 | PRJNA782235_P_NODE_19435_length_248_cov_2.834286_g19246_i0 | PRJNA782235 | 19435 | 248 | 2.834286 | 7.02902928 | Trueperaceae bacterium | 2026798 | Bacteria | Bacteria | 353 | 5.49e-93 | NTclustered | gi|2108366028|gb|CP070651.1| | 2026798 | g19246 | i0 | 92.369 | 452.709677419355 | 249 | 18 | 100 | 1 | 1 | 248 | 6530 | 6778 | MAG: Trueperaceae bacterium isolate bin86 chromosome | blastn | 112272 | 353 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Trueperales | Trueperaceae | Trueperaceae bacterium | |||
| 18615027 | 18615027 | PRJNA782235_P_NODE_26295_length_242_cov_1.775148_g26106_i0 | PRJNA782235 | 26295 | 242 | 1.775148 | 4.29585816 | Deinococcus radiophilus | 32062 | Bacteria | Bacteria | 331 | 2.5e-86 | NTclustered | gi|2152123021|gb|CP086380.1| | 32062 | g26106 | i0 | 91.322 | 3.97520661157025 | 242 | 21 | 100 | 0 | 1 | 242 | 113134 | 112893 | Deinococcus radiophilus strain ATCC 27603 chromosome, complete genome | blastn | 962 | 331 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus radiophilus | ||
| 20338817 | 20338817 | PRJNA782235_P_NODE_5596_length_372_cov_0.969900_g5407_i0 | PRJNA782235 | 5596 | 372 | 0.9699 | 3.608028 | Deinococcus | 1298 | Bacteria | Bacteria | 518 | 2.9e-142 | NTclustered | gi|1435316362|gb|CP031158.1| | 980427 | g5407 | i0 | 91.935 | 193.77688172043 | 372 | 27 | 100 | 2 | 1 | 372 | 1793580 | 1793212 | Deinococcus wulumuqiensis strain NEB 479 chromosome, complete genome | blastn | 72085 | 518 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus wulumuqiensis | ||
| 21166046 | 21166046 | PRJNA782235_P_NODE_3517_length_478_cov_1.582716_g3329_i0 | PRJNA782235 | 3517 | 478 | 1.582716 | 7.56538248 | Deinococcus sp. NW-56 | 2080419 | Bacteria | Bacteria | 562 | 1.74e-155 | NTclustered | gi|1339790003|gb|CP026516.1| | 2080419 | g3329 | i0 | 87.967 | 205.891213389121 | 482 | 50 | 100 | 8 | 1 | 478 | 543276 | 543753 | Deinococcus sp. NW-56 chromosome, complete genome | blastn | 98416 | 562 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus sp. NW-56 | ||
| 22889974 | 22889974 | PRJNA782235_P_NODE_20758_length_247_cov_1.189655_g20569_i0 | PRJNA782235 | 20758 | 247 | 1.189655 | 2.93844785 | Deinococcus | 1298 | Bacteria | Bacteria | 377 | 3.24e-100 | NTclustered | gi|470486828|ref|NR_076782.1| | 502394 | g20569 | i0 | 94.355 | 189.943319838057 | 248 | 11 | 100 | 3 | 1 | 247 | 1429 | 1674 | Deinococcus gobiensis strain I-0 23S ribosomal RNA gene, complete sequence | blastn | 46916 | 379 | 0.994722955145119 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus gobiensis | ||
| 22889981 | 22889981 | PRJNA782235_P_NODE_22918_length_246_cov_0.815029_g22729_i0 | PRJNA782235 | 22918 | 246 | 0.815029 | 2.00497134 | Truepera | 332248 | Bacteria | Bacteria | 427 | 3.16e-115 | NTclustered | gi|470486385|ref|NR_076754.1| | 332249 | g22729 | i0 | 97.967 | 624.463414634146 | 246 | 5 | 100 | 0 | 1 | 246 | 2917 | 2672 | Truepera radiovictrix strain RQ-24 23S ribosomal RNA gene, complete sequence | blastn | 153618 | 427 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Trueperales | Trueperaceae | Truepera | Truepera radiovictrix | ||
| 24164050 | 24164050 | PRJNA782235_P_NODE_8399_length_312_cov_2.167364_g8210_i0 | PRJNA782235 | 8399 | 312 | 2.167364 | 6.76217568 | Deinococcus | 1298 | Bacteria | Bacteria | 560 | 3.92e-155 | NTclustered | gi|2136551946|gb|MT672570.2| | 47478 | g8210 | i0 | 99.038 | 104.637820512821 | 312 | 3 | 100 | 0 | 1 | 312 | 30 | 341 | Deinococcus sp. strain HSC-46F16 16S ribosomal RNA gene, partial sequence | blastn | 32647 | 560 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus sp. | ||
| 25439177 | 25439177 | PRJNA782235_P_NODE_28700_length_233_cov_2.850000_g28511_i0 | PRJNA782235 | 28700 | 233 | 2.85 | 6.6405 | Deinococcus | 1298 | Bacteria | Bacteria | 392 | 1.08e-104 | NTclustered | gi|2706837832|gb|CP149782.1| | 3112952 | g28511 | i0 | 97.009 | 231.772532188841 | 234 | 5 | 100 | 2 | 1 | 233 | 1454036 | 1454268 | Deinococcus sp. VB142 chromosome 1, complete sequence | blastn | 54003 | 392 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus sp. VB142 |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;