RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJNA781427" and tax_phylum = "Uroviricota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Uroviricota · 5 ✖

tax_kingdom 1

bioproject 1

  • PRJNA781427 · 5 ✖

analysis 1

  • blastn · 5 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4589827 4589827 PRJNA781427_P_NODE_75464_length_251_cov_0.865169_g74580_i0 PRJNA781427 75464 251 0.865169 2.17157419 Maltschvirus maltsch 2956182 Viruses Viruses 392 1.18e-104   NTclustered gi|1862932854|emb|LR798223.1| 2100421 g74580 i0 94.841 1.00398406374502 252 11 100 2 1 251 13595 13845 uncultured Caudovirales phage genome assembly blastn 252 392 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes   Peduoviridae Maltschvirus Maltschvirus maltsch
4590104 4590104 PRJNA781427_P_NODE_87764_length_245_cov_0.895349_g86880_i0 PRJNA781427 87764 245 0.895349 2.19360505 Caudoviricetes sp. 2832643 Viruses Viruses 431 2.4299999999999996e-116   NTclustered gi|2053193164|tpg|BK016525.1| 2832643 g86880 i0 98.367 3 245 4 100 0 1 245 1401 1157 MAG TPA_asm: Caudoviricetes sp. isolate ctnY75, partial genome blastn 735 431 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
14790393 14790393 PRJNA781427_P_NODE_87712_length_245_cov_0.895349_g86828_i0 PRJNA781427 87712 245 0.895349 2.19360505 Maltschvirus maltsch 2956182 Viruses Viruses 270 5.609999999999999e-68   NTclustered gi|1839164149|emb|LR796536.1| 2100421 g86828 i0 86.531 2.00408163265306 245 33 100 0 1 245 7472 7228 uncultured Caudovirales phage genome assembly blastn 491 270 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes   Peduoviridae Maltschvirus Maltschvirus maltsch
21164088 21164088 PRJNA781427_P_NODE_74737_length_251_cov_0.865169_g73853_i0 PRJNA781427 74737 251 0.865169 2.17157419 Maltschvirus maltsch 2956182 Viruses Viruses 128 3.67e-25   NTclustered gi|1839152310|emb|LR796345.1| 2100421 g73853 i0 83.099 0.565737051792829 142 22 56 2 48 188 114782 114922 uncultured Caudovirales phage genome assembly blastn 142 128 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes   Peduoviridae Maltschvirus Maltschvirus maltsch
23714659 23714659 PRJNA781427_P_NODE_89519_length_244_cov_0.900585_g88635_i0 PRJNA781427 89519 244 0.900585 2.1974274 Caudoviricetes sp. 2832643 Viruses Viruses 52.8 0.022   NTclustered gi|2058083350|tpg|BK043185.1| 2832643 g88635 i0 96.774 0.127049180327869 31 1 13 0 132 162 29234 29204 MAG TPA_asm: Caudoviricetes sp. isolate ct5kE1, partial genome blastn 31 52.8 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;