RNAquarium Metadata Server
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contig_metadata

1 row where analysis = "blastn", bioproject = "PRJNA781427" and tax_phylum = "Nucleocytoviricota"

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tax_superkingdom 1

tax_phylum 1

  • Nucleocytoviricota · 1 ✖

tax_kingdom 1

bioproject 1

  • PRJNA781427 · 1 ✖

analysis 1

  • blastn · 1 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4588253 4588253 PRJNA781427_P_NODE_15144_length_649_cov_3.967014_g14314_i0 PRJNA781427 15144 649 3.967014 25.74592086 Trichoplusia ni ascovirus 6b 2077183 Viruses Viruses 56.5 0.005   NTclustered gi|1334372357|gb|KY434117.1| 2077183 g14314 i0 100 0.0462249614791988 30 0 5 0 288 317 12221 12250 Trichoplusia ni ascovirus 6b isolate TnAV-6b blastn 30 56.5 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Pimascovirales Ascoviridae Ascovirus Trichoplusia ni ascovirus 6b

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;