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contig_metadata

22 rows where analysis = "blastn", bioproject = "PRJNA781427" and tax_phylum = "Nematoda"

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tax_superkingdom 1

tax_phylum 1

  • Nematoda · 22 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA781427 · 22 ✖

analysis 1

  • blastn · 22 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
759833 759833 PRJNA781427_P_NODE_11921_length_755_cov_42.329912_g11150_i0 PRJNA781427 11921 755 42.329912 319.5908356 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 1345 0   NTclustered gi|2095998828|gb|MZ708958.1| 1904821 g11150 i0 98.808 4.84635761589404 755 9 100 0 1 755 4124 4878 Pseudocapillaria tomentosa mitochondrion, complete genome blastn 3659 1345 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa
2037507 2037507 PRJNA781427_P_NODE_7382_length_1015_cov_12.863057_g6777_i0 PRJNA781427 7382 1015 12.863057 130.56002855 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 1770 0   NTclustered gi|2095998828|gb|MZ708958.1| 1904821 g6777 i0 98.128 1.99113300492611 1015 19 100 0 1 1015 11733 10719 Pseudocapillaria tomentosa mitochondrion, complete genome blastn 2021 1770 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa
4589851 4589851 PRJNA781427_P_NODE_7664_length_992_cov_16.791077_g7046_i0 PRJNA781427 7664 992 16.791077 166.56748384 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 1760 0   NTclustered gi|2095998828|gb|MZ708958.1| 1904821 g7046 i0 98.69 4.85685483870968 992 13 100 0 1 992 13100 12109 Pseudocapillaria tomentosa mitochondrion, complete genome blastn 4818 1760 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa
5863653 5863653 PRJNA781427_P_NODE_25405_length_469_cov_4.530303_g24525_i0 PRJNA781427 25405 469 4.530303 21.24712107 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 837 0   NTclustered gi|2095998828|gb|MZ708958.1| 1904821 g24525 i0 98.932 0.997867803837953 468 5 99 0 1 468 10140 9673 Pseudocapillaria tomentosa mitochondrion, complete genome blastn 468 837 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa
5863713 5863713 PRJNA781427_P_NODE_27525_length_447_cov_1.925134_g26644_i0 PRJNA781427 27525 447 1.925134 8.60534898 Trichinella spiralis 6334 Nematoda Nematoda 278 6.56e-70   NTclustered gi|339246942|ref|XM_003375057.1| 6334 g26644 i0 78.788 0.959731543624161 429 79 95 10 8 430 668 1090 Trichinella spiralis transmembrane anterior posterior transformation protein 1 (Tsp_04290) mRNA, complete cds blastn 429 278 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella spiralis
5863958 5863958 PRJNA781427_P_NODE_36745_length_378_cov_6.777049_g35863_i0 PRJNA781427 36745 378 6.777049 25.61724522 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 699 0   NTclustered gi|1070586637|gb|KU987805.1| 1904821 g35863 i0 100 95.489417989418 378 0 100 0 1 378 567 944 Pseudocapillaria tomentosa 18S ribosomal RNA gene, partial sequence blastn 36095 699 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa
5864340 5864340 PRJNA781427_P_NODE_5065_length_1254_cov_1.577477_g4594_i0 PRJNA781427 5065 1254 1.577477 19.78156158 Trichinella spiralis 6334 Nematoda Nematoda 233 4.26e-56   NTclustered gi|339250219|ref|XM_003374047.1| 6334 g4594 i0 79.518 0.470494417862839 332 64 26 4 268 597 640 311 Trichinella spiralis zinc finger protein 423-like protein (Tsp_08822) mRNA, complete cds blastn 590 233 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella spiralis
8412957 8412957 PRJNA781427_P_NODE_11867_length_758_cov_2.651095_g11096_i0 PRJNA781427 11867 758 2.651095 20.0953001 Trichinella spiralis 6334 Nematoda Nematoda 442 3.8599999999999986e-119   NTclustered gi|339248356|ref|XM_003373118.1| 6334 g11096 i0 80.736 0.753298153034301 571 106 75 4 164 732 645 77 Trichinella spiralis neuronal calcium sensor 2 (Tsp_10012) mRNA, complete cds blastn 571 442 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella spiralis
9688438 9688438 PRJNA781427_P_NODE_16048_length_626_cov_3.591320_g15209_i0 PRJNA781427 16048 626 3.59132 22.4816632 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 1146 0   NTclustered gi|2095998828|gb|MZ708958.1| 1904821 g15209 i0 99.681 4.16453674121406 626 2 100 0 1 626 1655 2280 Pseudocapillaria tomentosa mitochondrion, complete genome blastn 2607 1146 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa
9689494 9689494 PRJNA781427_P_NODE_5668_length_1178_cov_8.619005_g5164_i0 PRJNA781427 5668 1178 8.619005 101.5318789 Trichinella spiralis 6334 Nematoda Nematoda 569 2.679999999999999e-157   NTclustered gi|339233103|ref|XM_003381621.1| 6334 g5164 i0 80.597 45.9490662139219 737 143 63 0 268 1004 795 59 Trichinella spiralis syntaxin-1A (Tsp_07354) mRNA, complete cds blastn 54128 569 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella spiralis
9690495 9690495 PRJNA781427_P_NODE_9888_length_848_cov_18.068387_g9179_i0 PRJNA781427 9888 848 18.068387 153.21992176 Trichinella spiralis 6334 Nematoda Nematoda 359 4.49e-94   NTclustered gi|339252409|ref|XM_003371380.1| 6334 g9179 i0 80.736 2.44693396226415 462 87 54 2 160 620 1 461 Trichinella spiralis troponin C, isoform 2 (Tsp_11636) mRNA, complete cds blastn 2075 359 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella spiralis
10964116 10964116 PRJNA781427_P_NODE_16189_length_622_cov_157.484517_g15347_i0 PRJNA781427 16189 622 157.484517 979.55369574 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 1110 0   NTclustered gi|2095998828|gb|MZ708958.1| 1904821 g15347 i0 98.875 2.5064308681672 622 7 100 0 1 622 7198 7819 Pseudocapillaria tomentosa mitochondrion, complete genome blastn 1559 1110 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa
14789604 14789604 PRJNA781427_P_NODE_5552_length_1193_cov_66.890179_g5053_i0 PRJNA781427 5552 1193 66.890179 797.99983547 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 2104 0   NTclustered gi|2095998828|gb|MZ708958.1| 1904821 g5053 i0 98.491 38.5674769488684 1193 18 100 0 1 1193 379 1571 Pseudocapillaria tomentosa mitochondrion, complete genome blastn 46011 2104 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa
16063926 16063926 PRJNA781427_P_NODE_71593_length_257_cov_1.255435_g70709_i0 PRJNA781427 71593 257 1.255435 3.22646795 Pristionchus microcercus 3308705 Nematoda Nematoda 137 6.27e-28   NTclustered gi|675118931|gb|KJ877345.1| 3308705 g70709 i0 81.503 7.06614785992218 173 26 66 6 2 171 357 526 Paroigolaimella micrura large subunit ribosomal protein 10 (rpl-10) mRNA, partial cds blastn 1816 137 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Neodiplogasteridae Pristionchus Pristionchus microcercus
19886673 19886673 PRJNA781427_P_NODE_10476_length_821_cov_80.378342_g9747_i0 PRJNA781427 10476 821 80.378342 659.90618782 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 1395 0   NTclustered gi|2095998828|gb|MZ708958.1| 1904821 g9747 i0 97.32 23.8989037758831 821 22 100 0 1 821 4124 4944 Pseudocapillaria tomentosa mitochondrion, complete genome blastn 19621 1395 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa
19887274 19887274 PRJNA781427_P_NODE_33276_length_400_cov_1.412844_g32395_i0 PRJNA781427 33276 400 1.412844 5.651376 Trichinella spiralis 6334 Nematoda Nematoda 75 8.18e-9   NTclustered gi|339239566|ref|XM_003381290.1| 6334 g32395 i0 84.211 0.19 76 12 19 0 262 337 1346 1421 Trichinella spiralis putative calcium binding EGF domain protein (Tsp_07869) mRNA, complete cds blastn 76 75 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella spiralis
19887291 19887291 PRJNA781427_P_NODE_3376_length_1536_cov_261.201640_g3047_i0 PRJNA781427 3376 1536 261.20164 4012.0571904 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 2704 0   NTclustered gi|2095998828|gb|MZ708958.1| 1904821 g3047 i0 98.438 43.232421875 1536 24 100 0 1 1536 7177 5642 Pseudocapillaria tomentosa mitochondrion, complete genome blastn 66405 2704 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa
19887445 19887445 PRJNA781427_P_NODE_396_length_3332_cov_21.605707_g355_i0 PRJNA781427 396 3332 21.605707 719.90215724 Ancylostoma caninum 29170 Nematoda Nematoda 996 0   NTclustered gi|86160923|gb|DQ358106.1| 29170 g355 i0 74.166 0.746998799519808 2489 601 74 37 621 3088 2708 241 Ancylostoma caninum paramyosin mRNA, complete cds blastn 2489 996 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Ancylostomatidae Ancylostoma Ancylostoma caninum
21162753 21162753 PRJNA781427_P_NODE_2337_length_1789_cov_9.567599_g2101_i0 PRJNA781427 2337 1789 9.567599 171.16434611 Trichinella spiralis 6334 Nematoda Nematoda 763 0   NTclustered gi|339246888|ref|XM_003375030.1| 6334 g2101 i0 83.057 3.18725544997205 844 140 47 3 371 1212 55 897 Trichinella spiralis putative LIM domain protein (Tsp_04264) mRNA, complete cds blastn 5702 763 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella spiralis
22439354 22439354 PRJNA781427_P_NODE_9578_length_864_cov_26.628319_g8879_i0 PRJNA781427 9578 864 26.628319 230.06867616 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 1563 0   NTclustered gi|2095998828|gb|MZ708958.1| 1904821 g8879 i0 99.306 1.33796296296296 864 6 100 0 1 864 7973 8836 Pseudocapillaria tomentosa mitochondrion, complete genome blastn 1156 1563 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa
23713427 23713427 PRJNA781427_P_NODE_4059_length_1407_cov_25.200900_g3683_i0 PRJNA781427 4059 1407 25.2009 354.576663 Trichinella spiralis 6334 Nematoda Nematoda 715 0   NTclustered gi|339254855|ref|XM_003372603.1| 6334 g3683 i0 82.045 15.3049040511727 841 149 60 2 219 1058 1 840 Trichinella spiralis tropomyosin (Tsp_11392) mRNA, complete cds blastn 21534 715 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella spiralis
23714480 23714480 PRJNA781427_P_NODE_8199_length_951_cov_521.100228_g7560_i0 PRJNA781427 8199 951 521.100228 4955.66316828 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 1674 0   NTclustered gi|2095998828|gb|MZ708958.1| 1904821 g7560 i0 99.781 48.2986330178759 912 2 96 0 9 920 3277 2366 Pseudocapillaria tomentosa mitochondrion, complete genome blastn 45932 1674 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;