RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA781427" and tax_phylum = "Heterolobosea"

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tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA781427 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9688677 9688677 PRJNA781427_P_NODE_25168_length_472_cov_2.007519_g24289_i0 PRJNA781427 25168 472 2.007519 9.47548968 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 60.2 2.74e-4   NTclustered gi|290998558|ref|XM_002681802.1| 5762 g24289 i0 100 0.0677966101694915 32 0 7 0 303 334 343 312 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_63086), partial mRNA blastn 32 60.2 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
14788834 14788834 PRJNA781427_P_NODE_27272_length_450_cov_1.225464_g26391_i0 PRJNA781427 27272 450 1.225464 5.514588 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 56.5 0.003   NTclustered gi|2119429858|ref|XM_044691307.1| 51637 g26391 i0 100 0.128888888888889 30 0 7 0 325 354 304 275 Naegleria lovaniensis uncharacterized protein (C9374_001944), partial mRNA blastn 58 56.5 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;