RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA781427" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA781427 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12241154 12241154 PRJNA781427_P_NODE_75050_length_251_cov_0.865169_g74166_i0 PRJNA781427 75050 251 0.865169 2.17157419 Eirene viridula 661989 Cnidaria other_Eukaryota 63.9 1.05e-5   NTclustered gi|256674541|gb|FJ550445.1| 661989 g74166 i0 76.224 13.7490039840637 143 20 56 7 1 141 1516 1646 Eirene viridula 28S ribosomal RNA gene, partial sequence blastn 3451 63.9 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Leptothecata Eirenidae Eirene Eirene viridula
18612051 18612051 PRJNA781427_P_NODE_34435_length_393_cov_0.937500_g33554_i0 PRJNA781427 34435 393 0.9375 3.684375 Anemonia sulcata 6108 Cnidaria other_Eukaryota 52.8 0.038   NTclustered gi|2917940712|emb|OZ237560.1| 6108 g33554 i0 100 0.0712468193384224 28 0 7 0 254 281 14954231 14954204 Anemonia sulcata genome assembly, chromosome: 6 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
18613282 18613282 PRJNA781427_P_NODE_81395_length_248_cov_0.880000_g80511_i0 PRJNA781427 81395 248 0.88 2.1824 Eunicella cavolini 317547 Cnidaria other_Eukaryota 52.8 0.022   NTclustered gi|2918369535|emb|OZ237717.1| 317547 g80511 i0 96.875 0.258064516129032 32 0 13 1 210 240 72158338 72158307 Eunicella cavolini genome assembly, chromosome: 1 blastn 64 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Eunicellidae Eunicella Eunicella cavolini

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;