RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA781427" and tax_phylum = "Balneolota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Balneolota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA781427 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
17340088 17340088 PRJNA781427_P_NODE_89874_length_244_cov_0.900585_g88990_i0 PRJNA781427 89874 244 0.900585 2.1974274 Balneola sp. 2024824 Bacteria Bacteria 130 9.88e-26   NTclustered gi|2021960826|gb|CP051255.1| 2024824 g88990 i0 88.288 0.454918032786885 111 10 45 3 1 110 2815125 2815233 MAG: Balneola sp. isolate EhC07 chromosome blastn 111 130 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae Balneola Balneola sp.
18612996 18612996 PRJNA781427_P_NODE_69695_length_262_cov_1.222222_g68811_i0 PRJNA781427 69695 262 1.222222 3.20222164 Balneola sp. 2024824 Bacteria Bacteria 174 4.8899999999999997e-39   NTclustered gi|2021960826|gb|CP051255.1| 2024824 g68811 i0 78.764 0.988549618320611 259 55 99 0 3 261 3666580 3666838 MAG: Balneola sp. isolate EhC07 chromosome blastn 259 174 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae Balneola Balneola sp.

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;