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contig_metadata

32 rows where analysis = "blastn", bioproject = "PRJNA781196" and tax_superkingdom = "Viruses"

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tax_phylum 2

tax_superkingdom 1

  • Viruses · 32 ✖

tax_kingdom 1

bioproject 1

  • PRJNA781196 · 32 ✖

analysis 1

  • blastn · 32 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
758999 758999 PRJNA781196_P_NODE_18921_length_386_cov_1.246006_g18544_i0 PRJNA781196 18921 386 1.246006 4.80958316 Closterovirus tristezae 3428013 Viruses Viruses 523 6.5e-144   NTclustered gi|1686977691|gb|MH323441.1| 12162 g18544 i0 91.361 98.6787564766839 382 33 99 0 1 382 14549 14930 Citrus tristeza virus strain CN-L1-ZT1, complete genome blastn 38090 523 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae Closterovirus Closterovirus tristezae
2035347 2035347 PRJNA781196_P_NODE_40582_length_281_cov_1.500000_g40205_i0 PRJNA781196 40582 281 1.5 4.215 Zebrafish picornavirus 1 2304617 Viruses Viruses 479 9.999999999999999e-131   NTclustered gi|2500378199|ref|NC_076245.1| 2304617 g40205 i0 97.509 2.7900355871886098 281 5 99 2 2 281 303 24 Zebrafish picornavirus 1 strain IDEXX/ZfPV-1/2017/USA, complete genome blastn 784 479 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
2035484 2035484 PRJNA781196_P_NODE_48962_length_255_cov_1.549451_g48585_i0 PRJNA781196 48962 255 1.549451 3.95110005 Closterovirus tristezae 3428013 Viruses Viruses 329 9.56e-86   NTclustered gi|1409964340|gb|MF595989.1| 12162 g48585 i0 89.922 100.305882352941 258 22 100 4 1 255 13604 13860 Citrus tristeza virus isolate M423GR, complete genome blastn 25578 329 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae Closterovirus Closterovirus tristezae
3310667 3310667 PRJNA781196_P_NODE_47483_length_259_cov_2.096774_g47106_i0 PRJNA781196 47483 259 2.096774 5.43064466 Zebrafish picornavirus 1 2304617 Viruses Viruses 429 9.329999999999999e-116   NTclustered gi|1812398529|gb|MN524064.1| 2304617 g47106 i0 96.525 3 259 9 100 0 1 259 1841 2099 Zebrafish picornavirus 1 isolate CZAR/ZfPV/2018/Utah/USA, complete genome blastn 777 429 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
3310688 3310688 PRJNA781196_P_NODE_48643_length_256_cov_1.546448_g48266_i0 PRJNA781196 48643 256 1.546448 3.95890688 Closterovirus tristezae 3428013 Viruses Viruses 473 4.189999999999999e-129   NTclustered gi|1995158870|gb|MW365403.1| 12162 g48266 i0 100 80.71875 256 0 100 0 1 256 9650 9395 Citrus tristeza virus isolate YN1-6, complete genome blastn 20664 473 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae Closterovirus Closterovirus tristezae
4587239 4587239 PRJNA781196_P_NODE_16604_length_408_cov_0.898507_g16227_i0 PRJNA781196 16604 408 0.898507 3.66590856 Zebrafish picornavirus 1 2304617 Viruses Viruses 693 0   NTclustered gi|1812398529|gb|MN524064.1| 2304617 g16227 i0 97.304 3 408 11 100 0 1 408 4499 4906 Zebrafish picornavirus 1 isolate CZAR/ZfPV/2018/Utah/USA, complete genome blastn 1224 693 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
4587363 4587363 PRJNA781196_P_NODE_24524_length_347_cov_1.861314_g24147_i0 PRJNA781196 24524 347 1.861314 6.45875958 Closterovirus tristezae 3428013 Viruses Viruses 630 3.319999999999999e-176   NTclustered gi|1046894614|gb|KU883265.1| 12162 g24147 i0 99.424 100.048991354467 347 2 100 0 1 347 18909 19255 Citrus tristeza virus isolate B390-5, complete genome blastn 34717 630 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae Closterovirus Closterovirus tristezae
4587531 4587531 PRJNA781196_P_NODE_36784_length_293_cov_1.418182_g36407_i0 PRJNA781196 36784 293 1.418182 4.15527326 Zebrafish picornavirus 1 2304617 Viruses Viruses 514 2.88e-141   NTclustered gi|1812398529|gb|MN524064.1| 2304617 g36407 i0 98.294 2.99317406143345 293 5 100 0 1 293 7858 7566 Zebrafish picornavirus 1 isolate CZAR/ZfPV/2018/Utah/USA, complete genome blastn 877 514 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
5862875 5862875 PRJNA781196_P_NODE_47345_length_260_cov_1.251337_g46968_i0 PRJNA781196 47345 260 1.251337 3.2534762 Closterovirus tristezae 3428013 Viruses Viruses 481 2.55e-131   NTclustered gi|160690873|gb|EU262683.1| 12162 g46968 i0 100 99.8269230769231 260 0 100 0 1 260 258 517 Citrus tristeza virus clone Cun26-5 p23 (p23) gene, partial cds blastn 25955 481 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae Closterovirus Closterovirus tristezae
5863082 5863082 PRJNA781196_P_NODE_60885_length_246_cov_0.901734_g60508_i0 PRJNA781196 60885 246 0.901734 2.21826564 Closterovirus tristezae 3428013 Viruses Viruses 449 6.74e-122   NTclustered gi|1189354698|gb|KY110737.1| 12162 g60508 i0 99.593 99.9552845528455 246 1 100 0 1 246 14417 14172 Citrus tristeza virus strain CSL01, complete genome blastn 24589 449 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae Closterovirus Closterovirus tristezae
5863210 5863210 PRJNA781196_P_NODE_7105_length_587_cov_1.321012_g6731_i0 PRJNA781196 7105 587 1.321012 7.75434044 Closterovirus tristezae 3428013 Viruses Viruses 1074 0   NTclustered gi|1995158870|gb|MW365403.1| 12162 g6731 i0 99.659 100 587 2 100 0 1 587 9091 8505 Citrus tristeza virus isolate YN1-6, complete genome blastn 58700 1074 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae Closterovirus Closterovirus tristezae
8412205 8412205 PRJNA781196_P_NODE_23527_length_353_cov_1.114286_g23150_i0 PRJNA781196 23527 353 1.114286 3.93342958 Closterovirus tristezae 3428013 Viruses Viruses 459 1.6799999999999998e-124   NTclustered gi|1686977691|gb|MH323441.1| 12162 g23150 i0 90.085 97.2011331444759 353 35 100 0 1 353 16097 16449 Citrus tristeza virus strain CN-L1-ZT1, complete genome blastn 34312 459 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae Closterovirus Closterovirus tristezae
8412272 8412272 PRJNA781196_P_NODE_28347_length_328_cov_0.913725_g27970_i0 PRJNA781196 28347 328 0.913725 2.997018 Closterovirus tristezae 3428013 Viruses Viruses 606 5.249999999999998e-169   NTclustered gi|2220546765|gb|MZ870354.1| 12162 g27970 i0 100 60.515243902439 328 0 100 0 1 328 412 85 Citrus tristeza virus isolate RB, complete genome blastn 19849 606 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae Closterovirus Closterovirus tristezae
9687736 9687736 PRJNA781196_P_NODE_35448_length_298_cov_1.333333_g35071_i0 PRJNA781196 35448 298 1.333333 3.97333234 Potexvirus citriflavivenae 3433772 Viruses Viruses 540 4.85e-149   NTclustered gi|2866530887|gb|PQ567902.1| 1214459 g35071 i0 99.329 89.9395973154362 298 2 100 0 1 298 54 351 Citrus yellow vein clearing virus isolate CYVCV-FL-16, complete genome blastn 26802 540 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus citriflavivenae
10963217 10963217 PRJNA781196_P_NODE_26629_length_336_cov_1.186312_g26252_i0 PRJNA781196 26629 336 1.186312 3.98600832 Closterovirus tristezae 3428013 Viruses Viruses 468 2.66e-127   NTclustered gi|482867487|gb|KC525952.1| 12162 g26252 i0 91.916 99.7946428571429 334 27 99 0 3 336 17876 17543 Citrus tristeza virus isolate T3, complete genome blastn 33531 468 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae Closterovirus Closterovirus tristezae
12238577 12238577 PRJNA781196_P_NODE_12590_length_459_cov_1.272021_g12214_i0 PRJNA781196 12590 459 1.272021 5.83857639 Suillus luteus hypovirus 1 3067807 Viruses Viruses 671 0   NTclustered gi|2560562976|gb|OQ862556.1| 3067807 g12214 i0 93.028 1 459 32 100 0 1 459 7114 6656 Suillus luteus hypovirus 1 isolate SlHV1 polyprotein gene, partial cds blastn 459 671 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Hypoviridae   Suillus luteus hypovirus 1
12238753 12238753 PRJNA781196_P_NODE_24970_length_345_cov_1.312500_g24593_i0 PRJNA781196 24970 345 1.3125 4.528125 Zebrafish picornavirus 1 2304617 Viruses Viruses 568 2.6199999999999992e-157   NTclustered gi|2500378199|ref|NC_076245.1| 2304617 g24593 i0 96.501 2.99420289855072 343 12 99 0 1 343 2535 2877 Zebrafish picornavirus 1 strain IDEXX/ZfPV-1/2017/USA, complete genome blastn 1033 568 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
13512907 13512907 PRJNA781196_P_NODE_25011_length_345_cov_1.139706_g24634_i0 PRJNA781196 25011 345 1.139706 3.9319857 Closterovirus tristezae 3428013 Viruses Viruses 472 2.1099999999999999e-128   NTclustered gi|2441427852|gb|ON094625.1| 12162 g24634 i0 91.304 95.9478260869565 345 30 100 0 1 345 13046 12702 Citrus tristeza virus isolate JY-2, complete genome blastn 33102 472 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae Closterovirus Closterovirus tristezae
13512947 13512947 PRJNA781196_P_NODE_27671_length_331_cov_1.209302_g27294_i0 PRJNA781196 27671 331 1.209302 4.00278962 Potexvirus citriflavivenae 3433772 Viruses Viruses 595 1.1499999999999998e-165   NTclustered gi|1370705602|gb|KY933795.1| 1214459 g27294 i0 99.094 82.9969788519637 331 3 100 0 1 331 2091 1761 Citrus yellow vein clearing virus isolate ZJ_2, complete genome blastn 27472 595 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus citriflavivenae
13513021 13513021 PRJNA781196_P_NODE_32651_length_309_cov_1.122881_g32274_i0 PRJNA781196 32651 309 1.122881 3.46970229 Closterovirus tristezae 3428013 Viruses Viruses 558 1.39e-154   NTclustered gi|1046894614|gb|KU883265.1| 12162 g32274 i0 99.351 45.1456310679612 308 2 99 0 1 308 2582 2889 Citrus tristeza virus isolate B390-5, complete genome blastn 13950 558 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae Closterovirus Closterovirus tristezae
13513135 13513135 PRJNA781196_P_NODE_39051_length_286_cov_1.112676_g38674_i0 PRJNA781196 39051 286 1.112676 3.18225336 Closterovirus tristezae 3428013 Viruses Viruses 483 7.909999999999998e-132   NTclustered gi|405132112|gb|JX266713.1| 12162 g38674 i0 97.193 15.506993006993 285 8 99 0 1 285 9842 10126 Citrus tristeza virus isolate Taiwan-Pum/M/T5, complete genome blastn 4435 483 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae Closterovirus Closterovirus tristezae
17337191 17337191 PRJNA781196_P_NODE_14794_length_428_cov_1.394366_g14417_i0 PRJNA781196 14794 428 1.394366 5.96788648 Closterovirus tristezae 3428013 Viruses Viruses 780 0   NTclustered gi|1995158870|gb|MW365403.1| 12162 g14417 i0 99.533 98.0864485981308 428 2 100 0 1 428 17297 16870 Citrus tristeza virus isolate YN1-6, complete genome blastn 41981 780 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae Closterovirus Closterovirus tristezae
17337242 17337242 PRJNA781196_P_NODE_18374_length_391_cov_0.981132_g17997_i0 PRJNA781196 18374 391 0.981132 3.83622612 Zebrafish picornavirus 1 2304617 Viruses Viruses 601 2.9599999999999992e-167   NTclustered gi|1990739381|tpg|BK011179.1| 2304617 g17997 i0 94.373 3 391 22 100 0 1 391 1942 1552 TPA_asm: Zebrafish picornavirus 1 strain NCSZCF/ZfPV/2015/North Carolina/USA, complete genome blastn 1173 601 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
17337297 17337297 PRJNA781196_P_NODE_22374_length_361_cov_1.083333_g21997_i0 PRJNA781196 22374 361 1.083333 3.91083213 Potexvirus citriflavivenae 3433772 Viruses Viruses 656 0   NTclustered gi|2866530880|gb|PQ567901.1| 1214459 g21997 i0 99.446 83.8365650969529 361 2 100 0 1 361 4565 4205 Citrus yellow vein clearing virus isolate CYVCV-FL-15, complete genome blastn 30265 656 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus citriflavivenae
17337365 17337365 PRJNA781196_P_NODE_26674_length_336_cov_1.136882_g26297_i0 PRJNA781196 26674 336 1.136882 3.81992352 Closterovirus tristezae 3428013 Viruses Viruses 621 1.9299999999999997e-173   NTclustered gi|1995158870|gb|MW365403.1| 12162 g26297 i0 100 99.9970238095238 336 0 100 0 1 336 13619 13284 Citrus tristeza virus isolate YN1-6, complete genome blastn 33599 621 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae Closterovirus Closterovirus tristezae
18610508 18610508 PRJNA781196_P_NODE_115_length_2754_cov_2.461768_g85_i0 PRJNA781196 115 2754 2.461768 67.79709072 Zebrafish picornavirus 1 2304617 Viruses Viruses 4532 0   NTclustered gi|2500378199|ref|NC_076245.1| 2304617 g85 i0 96.37 3.00254175744372 2755 98 100 2 1 2754 7937 5184 Zebrafish picornavirus 1 strain IDEXX/ZfPV-1/2017/USA, complete genome blastn 8269 4532 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
19885956 19885956 PRJNA781196_P_NODE_25636_length_341_cov_1.455224_g25259_i0 PRJNA781196 25636 341 1.455224 4.96231384 Closterovirus tristezae 3428013 Viruses Viruses 448 3.5199999999999996e-121   NTclustered gi|1686977691|gb|MH323441.1| 12162 g25259 i0 90.379 99.9589442815249 343 29 100 3 1 341 10855 11195 Citrus tristeza virus strain CN-L1-ZT1, complete genome blastn 34086 448 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae Closterovirus Closterovirus tristezae
21161510 21161510 PRJNA781196_P_NODE_10777_length_490_cov_1.673861_g10401_i0 PRJNA781196 10777 490 1.673861 8.2019189 Potexvirus citriflavivenae 3433772 Viruses Viruses 883 0   NTclustered gi|1822142632|gb|MK415925.1| 1214459 g10401 i0 99.184 85.9734693877551 490 4 100 0 1 490 3948 3459 Citrus yellow vein clearing virus isolate JS-RN1, complete genome blastn 42127 883 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus citriflavivenae
21161632 21161632 PRJNA781196_P_NODE_18957_length_386_cov_0.996805_g18580_i0 PRJNA781196 18957 386 0.996805 3.8476673 Closterovirus tristezae 3428013 Viruses Viruses 691 0   NTclustered gi|1491812315|gb|MH051719.1| 12162 g18580 i0 98.964 99.3937823834197 386 4 100 0 1 386 10527 10912 Citrus tristeza virus isolate T3-KB, complete genome blastn 38366 691 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae Closterovirus Closterovirus tristezae
22436727 22436727 PRJNA781196_P_NODE_46038_length_264_cov_1.225131_g45661_i0 PRJNA781196 46038 264 1.225131 3.23434584 Closterovirus tristezae 3428013 Viruses Viruses 483 7.219999999999998e-132   NTclustered gi|1995158870|gb|MW365403.1| 12162 g45661 i0 99.621 48.6856060606061 264 1 100 0 1 264 6079 6342 Citrus tristeza virus isolate YN1-6, complete genome blastn 12853 483 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae Closterovirus Closterovirus tristezae
24985887 24985887 PRJNA781196_P_NODE_44440_length_268_cov_2.800000_g44063_i0 PRJNA781196 44440 268 2.8 7.504 Zebrafish picornavirus 1 2304617 Viruses Viruses 435 2.09e-117   NTclustered gi|1990739381|tpg|BK011179.1| 2304617 g44063 i0 96.565 2.95522388059702 262 9 98 0 7 268 5190 4929 TPA_asm: Zebrafish picornavirus 1 strain NCSZCF/ZfPV/2015/North Carolina/USA, complete genome blastn 792 435 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
24986295 24986295 PRJNA781196_P_NODE_9380_length_520_cov_1.465324_g9005_i0 PRJNA781196 9380 520 1.465324 7.6196848 Closterovirus tristezae 3428013 Viruses Viruses 955 0   NTclustered gi|1995158870|gb|MW365403.1| 12162 g9005 i0 99.808 99.3519230769231 520 1 100 0 1 520 15904 15385 Citrus tristeza virus isolate YN1-6, complete genome blastn 51663 955 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae Closterovirus Closterovirus tristezae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;